Table 1.
DESeq2 analysis outcome parameters per gene for each treatment condition (Love et al. 2014)
| Parameter | Description |
|---|---|
| Ctr. read counts | Normalised read counts of 0.1% DMSO control samples |
| Treat. read counts | Normalised read counts of treatment samples |
| baseMean | Average of normalised counts taken over all samples of compared groups |
| log2FoldChange | log2 fold change of treatment group over control group |
| lfcSE | Standard error of the log2Fold change |
| stat | Wald statistic |
| pvalue | Wald test p value |
| padj | Benjamini–Hochberg adjusted p value |