Table 2.
Annotation of the six ORFs that showed the highest degree of significance in relation to the ORF differences found between the two CC5 MRSA groups of pangenomes: RdJ and non-RdJ.
| ORF product | log2 fold-change | −log10 p-value | Predicted product | Mutation (nucleotide) | Type of mutation |
|---|---|---|---|---|---|
| Aur | 1 | 270.3 | Zinc metalloproteinase aureolysin | A1106G | Nonsynonymous |
| Trpg | 1 | 252.7 | Anthranilate synthase component | A337G | Nonsynonymous |
| Pcka | 1 | 245.3 | Phosphoenolpyruvate carboxykinase | A406G | Synonymous |
| Sa0849 | 0.9 | 226.9 | Hypothetical protein, similar to peptide binding protein OppA | C1597T | Nonsynonymous |
| Sa1437 | 1 | 226.9 | Hypothetical protein | T325C | Synonymous |
| Sa0667 | 1 | 212.3 | Hypothetical protein | A406G | Synonymous |