Antibodies |
|
anti-RAD51 (clone H-92) |
Santa Cruz Biotechnology |
Cat# sc-8349; RRID: AB_2253533
|
anti-γH2AX (clone 20E3) |
Cell Signaling Technology |
Cat# 9718; RRID: AB_2118009
|
anti-geminin (clone 1A8) |
Abcam |
Cat# ab104306; RRID: AB_10889692
|
anti-α tubulin |
GeneTex |
Cat# GTX112141; RRID: AB_10722892
|
anti-p53 |
GeneTex |
Cat# GTX102965; RRID: AB_1952339
|
anti-GAPDH |
GeneTex |
Cat# GTX100118; RRID: AB_1080976
|
anti-pan cytokeratin (clone AE1/AE3)-Alexa Fluor 488 conjugated |
Invitrogen |
Cat# 53-9003-82; RRID: AB_1834350
|
anti-PAX8 |
Proteintech |
Cat# 10336-1-AP; RRID: AB_2236705
|
Goat anti-rabbit IgG (HRP) |
GeneTex |
Cat# GTX213110–01; RRID: AB_10618573
|
Goat anti-rabbit IgG-DyLight 488 conjugated |
Thermo Fisher Scientific |
Cat# 35553; RRID: AB_1965947
|
Goat anti-mouse IgG-Alexa Fluor 647 conjugated |
Thermo Fisher Scientific |
Cat# A-21236; RRID: AB_2535805
|
|
Bacterial and virus strains |
|
AdenoX-pCMV-I-SceI-mCherry |
This paper |
N/A |
AdenoX-pCMV-DR-GFP-pPGK-ECFP |
This paper |
N/A |
|
Biological samples |
|
Primary ovarian cancer cells derived from tumor tissue |
This paper |
N/A |
Primary ovarian cancer cells derived from ascites |
This paper |
N/A |
|
Chemicals, peptides, and recombinant proteins |
|
Olaparib |
Selleckchem |
Cat# S1060 |
B02 |
Cayman Chemical |
Cat# 22133 |
|
Critical commercial assays |
|
Adeno-X Adenoviral System 3 |
Clontech |
Cat# 6322666 |
Adeno-X Maxi Purification Kit |
Clontech |
Cat# 631533 |
alamarBlue Cell Viability Reagent |
Thermo Fisher Scientific |
Cat# DAL1025 |
Tumor Dissociation Kit |
Miltenyi Biotech |
Cat# 130-095-929 |
Ammonium Chloride Solution |
STEMCELL Technologies |
Cat# 07850 |
Tumor Cell Isolation kit |
Miltenyi Biotech |
Cat# 130-108-339 |
QIAamp DNA Mini kit |
QIAGEN |
Cat# 51304 |
|
Deposited data |
|
whole-exome sequencing datasets for OCC-2 |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX18246139 |
whole-exome sequencing datasets for OCC-3 |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742482 |
whole-exome sequencing datasets for OCC-5-a |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742483 |
whole-exome sequencing datasets for OCC-7-a |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742484 |
whole-exome sequencing datasets for OCC-9-a |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742485 |
whole-exome sequencing datasets for OCC-10-a |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742477 |
whole-exome sequencing datasets for OCC-12 |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742478 |
whole-exome sequencing datasets for OCC-14-a |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX16742479 |
whole-exome sequencing dataset for OCC-28 |
This paper |
https://www.ncbi.nlm.nih.gov/sra/SRX17907740 |
|
Experimental models: Cell lines |
|
HeLa cells |
ATCC |
Cat# CCL-2; RRID: CVCL_0030 |
U2OS cells |
ATCC |
Cat# HTB-96 |
Hs578T cells |
ATCC |
Cat# HTB-126 |
MDA-MB-23 cells |
ATCC |
Cat# CRM-HTB-26 |
MDA-MB-436 cells |
ATCC |
Cat# HTB-130 |
SKOV3 cells |
ATCC |
Cat# HTB-77 |
TOV-21G cells |
ATCC |
Cat# CRL-3577 |
UWB1.289 cells |
ATCC |
Cat# CRL-2945 |
OVCA429 cells |
Obtained from Ruby Yun-Ju Huang (National Taiwan University, Taiwan) |
N/A |
RMG1 cells |
Obtained from Wendy W. Hwang-Verslues (Academia Sinica, Taiwan) |
N/A |
HCT116 cells |
ECACC |
Cat# 91091005 |
HCT116 BRCA2−/− cells |
ECACC |
Cat# 16071901 |
AdenoX-293 cells |
Clontech |
Cat# 632271 |
|
Oligonucleotides |
|
siRNAs targeting human RAD51 |
GE Dharmacon |
Cat# J-003530-10-0020 |
siRNA non-targeting pool control |
GE Dharmacon |
Cat# D-001810-10-20 |
|
Recombinant DNA |
|
pCMV6-AC-GFP |
OriGene |
Cat# PS100010 |
pAdenoX-PRLS |
Clontech |
Cat# 632260 |
pAdenoX-pCMV-GFP |
This paper |
N/A |
pAdenoX-pCMV-I-SceI-mCherry |
This paper |
N/A |
pAdenoX-pCMV-DR-GFP-pPGK-ECFP |
This paper |
N/A |
|
Software and algorithms |
|
Burrows-Wheeler Aligner v0.5.9 |
https://bio-bwa.sourceforge.net/ |
https://bio-bwa.sourceforge.net/ |
SAM tools v0.1.18 |
https://samtools.sourceforge.net/ |
https://samtools.sourceforge.net/ |
Picard v1.54 |
https://github.com/broadinstitute/picard |
https://github.com/broadinstitute/picard |
Genome Analysis Toolkit v4 |
https://gatk.broadinstitute.org/hc/en-us |
https://gatk.broadinstitute.org/hc/en-us |
GraphPad Prism v7 |
https://www.graphpad.com/ |
https://www.graphpad.com/ |