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. 2023 Dec 4;23:381. doi: 10.1186/s12866-023-03133-z

Table 6.

Transcription rates of genes involved in cell structurea

Hfx. alexandrinus
DSM 27206 ORFb
Gene name Log2FC Annotation
0.1 mM 0.25 mM 0.5 mM
Hfx-2019-SC1-cds84 - 4.64 - SHCOT domain-containing membrane protein
Hfx-2019-SC1-cds278 bmpA - - 2.44 Basic membrane protein A
Hfx-2019-SC5-cds185 - - 2.21 S-layer domain-containing protein
Hfx-2019-SC4-cds59 - -3.43 - PGF-CTERM sorting domain-containing protein

aRNA-Seq was used to determine the expression levels of the genes in Hfx. alexandrinus DSM 27206, as detailed in the section on Materials and Methods. The data are the average of three replicates. The threshold of differential expression genes was: |log2(FoldChange)|> 1 and qvalue < 0.00. Dashes indicate that there were minimal changes to the transcription, not considered statistically significant. bThe gene name, number, and annotation were generated through the gDNA sequencing of the tested strain, as described in the Materials and Methods section