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Interaction energy values calculated using RNAsubopt between anti-SD sequence and SD sequence upstream of ccdA and ccdB gene across different bacterial species
| ccdA | ccdB | |||
|---|---|---|---|---|
| Putative SD sequence | MFE (kcal/mol) | Putative SD sequence | MFE (kcal/mol) | |
| Escherichia coli | AAAGAGGT | -6.7 | AGGGACTG | -3.7 |
| Klebsiella pneumoniae | TCCGGAGT | -6.1 | AGGGACTG | -3.7 |
| Salmonella enterica | AAAGAGGT | -6.7 | AGGAACTG | -3.7 |
| Shigella flexneri | AGGTGTAA | -5.8 | CGGAGCCT | -5.8 |
