TABLE 1.
Characteristics of E. coli strains containing smi promoter-luxCDABE fusions
| Strain | Plasmid | Gene fused to luxCDABE | Basal RLUa | SM response ratiob | No. foundc |
|---|---|---|---|---|---|
| DPD2081 | pDEW213 | f415 | 0.2 | 1.83 ± 0.14 | 3 |
| DPD2084 | pDEW215 | yciG | 0.27 | 1.58 ± 0.22 | 1 |
| DPD2087 | pDEW218 | inaA | 9.8 | 1.57 ± 0.40 | 1 |
| DPD2088 | pDEW219 | yohF | 0.14 | 1.71 ± 0.12 | 2 |
| DPD2089 | pDEW220 | o82/o521 | 1.4 | 1.54 ± 0.11 | 1 |
| DPD2090 | pDEW221 | osmY | 0.08 | 1.78 ± 0.10 | 1 |
| DPD2092 | pDEW223 | o513 | 5.1 | 1.35 ± 0.19 | 1 |
| DPD3501 | pDEW301 | frvX | 13.4 | 3.09 ± 0.96 | 1 |
| DPD3505 | pDEW305 | f253a | 0.9 | 1.52 ± 0.29 | 2 |
| DPD3507 | pDEW307 | sohA | 62.4 | 1.20 ± 0.06 | 1 |
| DPD3509 | pDEW309 | poxB | 1.5 | 1.72 ± 0.09 | 1 |
| DPD3512 | pDEW312 | ldcC | 0.5 | 2.10 ± 0.22 | 1 |
| DPD2083 | pDEW201 | None | 0.002 |
The RLU reading from the culture grown in the wells of a microplate, untreated with SM, at the initial time point of the primary screen was recorded as the basal light output. This value was expected to roughly correlate to the amount of transcription initiation at promoters upstream of luxCDABE.
Calculated by dividing the RLU of the SM-treated culture by the RLU of the untreated culture at about 180 min (except the ratio for strain DPD3507, which was calculated at 120 min) after addition of cells to SM in the second screening test. Values are means and standard deviations of the triplicate cultures.
Number of independent plasmids found with the same fusion of E. coli chromosomal DNA to luxCDABE as in the representative strain listed. In each case when multiple hits were obtained, the joint of lux to the chromosomal segment was identical.