Skip to main content
. 2023 Nov 22;12:e74060. doi: 10.7554/eLife.74060

Figure 3. Biochemical analyses of residue 417 in regulating the conformation of membrane-anchored full-length SARS-CoV-2 spike and of the functions of the spike in different conformations.

(A) Protein pull-down assay using recombinant human ACE2 as the bait and cell-surface-anchored full-length SARS-CoV-2 spike as the target. The spike contains either Lys417 (wild-type residue) or Val417 (mutant residue). Top: cell-surface-expressed SARS-CoV-2 spike. Middle: pull-down results using His6-tagged ACE2. Bottom: pull-down results using Fc-tagged ACE2 (Figure 3—source data 1). The expected molecular weights of SARS-CoV-2 spike monomer and S2 monomer are ~180 kDa and ~80 kDa, respectively. (B) Flow cytometry assay to detect the interactions between recombinant human ACE2 and cell-surface-anchored full-length SARS-CoV-2 spike (Figure 3—source data 2). The spike contains either Lys417 (wild-type residue) or Val417 (mutant residue) and contains either intact furin motif or inactivated furin motif. See Figure 3—figure supplement 1 for details of this experiment. Data are mean + SEM. A comparison (two-tailed Student’s t-test) was performed on data between indicated groups (n = 3). ***p<0.001. (C) SARS-CoV-2 pseudovirus entry into human-ACE2-expressing cells. The virus-surface-anchored spike contains either Lys417 (wild-type residue) or Val417 (mutant residue). Top: pseudovirus entry efficiency normalized against the expression level of the spike (see bottom) (Figure 3—source data 3). Bottom: SARS-CoV-2 spike in packaged pseudoviruses (Figure 3—source data 4). Data are mean + SEM. A comparison (two-tailed Student’s t-test) was performed on data between indicated groups (n = 8). ***p<0.001. All experiments in this figure were repeated independently three times with similar results.

Figure 3—source data 1. Raw image for Figure 3A.
Figure 3—source data 2. Numerical data for Figure 3B.
Figure 3—source data 3. Numerical data for Figure 3C.
Figure 3—source data 4. Raw image for Figure 3C.

Figure 3.

Figure 3—figure supplement 1. Flow cytometry assay on the interactions between cell-surface-anchored full-length trimeric spike and recombinant human ACE2.

Figure 3—figure supplement 1.

HEK293T cells expressing full-length C9-tagged prototypic SARS-CoV-2 spike (containing either Lys417 or Val417 and containing either intact furin motif or inactivated furin motif) were incubated with recombinant Fc-tagged human ACE2. A fluorescence-labeled anti-Fc-tag antibody and a fluorescence-labeled anti-C9-tag antibody were used to label cell-bound ACE2 and cell-surface-expressed spike, respectively. The dot plots display fluorescence intensities indicative of the interactions between one of the spikes and ACE2. The accompanying table shows the percentage of labeled cells in quadrants Q1, Q2, Q3, and Q4 for each of the conditions. (A) (-) control - cells transfected with the vector only. (B) K417-spike. (C) V417-spike. (D) V417-spike containing an inactivated furin motif. (E) K417-spike containing an inactivated furin motif.