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. 2023 Nov 23;10(12):292–295. doi: 10.15698/mic2023.12.810

Table 2.

Number and percentage of genes in sequenced exDNA from exhausted media of different fedbatch conditions (EFC and LFC at the end of the runs and EFC at 6h) compared to eccDNA [33].

The percentages refer to genes included in specific KEGG metabolic pathways either exclusively associated to respiratory metabolism (TCA cycle, pentose phosphate, oxidative phosphorylation) or common to both fermentative and respiratory metabolism (glucose pathways and cell cycle).

Genes in exDNA TCA cycle Pentose phosphate Oxidative phosphorylation Glycolysis / gluconeogenesis Cell cycle
Genes in KEGG pathway 31 28 76 55 130
EFC 1001 2 6% 3 11% 0 0% 10 18% 24 18%
EFC_6h 1823 7 23% 11 39% 2 3% 17 31% 45 35%
LFC 4632 22 71% 23 82% 4 5% 40 73% 101 78%
eccDNA 1861 16 52% 10 36% 2 3% 0 0% 42 32%