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. 2023 Dec 4;13:21404. doi: 10.1038/s41598-023-48398-6

Table 3.

List of the amino acids that form the identified major binding pocket A. 133 amino acids form one of the major pockets (Pocket A) of RdRp (columns 1–7) and the key residues of RdRp in complex with carvedilol and its metabolites (column 8).

133 amino acids that form one of the major pockets (Pocket 1) of RdRp Key residues
ALA_34_A VAL_166_A TYR_217_A THR_248_A PRO_620_A SER_709_A LEU_775_A ASP_36_A
PHE_35_A PRO_169_A ASP_218_A ARG_249_A LYS_621_A VAL_720_A VAL_776_A PHE_45_A
ASP_36_A ILE_171_A PHE_219_A TYR_455_A ARG_624_A LEU_723_A ALA_777_A VAL_128_A
TYR_38_A LEU_172_A GLY_220_A ARG_457_A ALA_625_A GLN_724_A PHE_782_A ARG_132_A
PHE_45_A VAL_174_A ASP_221_A TYR_458_A PRO_627_A LEU_727_A SER_784_A HIS_133_A
MET_124_A TYR_175_A PHE_222_A ASN_459_A LEU_630_A TYR_728_A VAL_785_A LEU_240_A
ALA_125_A ALA_176_A PRO_232_A LEU_460_A MET_633_A LEU_731_A LEU_786_A CYS_464_A
LEU_127_A LEU_178_A VAL_233_A PRO_461_A ASN_695_A TYR_732_A TYR_787_A ASP_465_A
VAL_128_A ARG_181_A VAL_234_A THR_462_A ILE_696_A ARG_733_A TYR_788_A GLN_468_A
TYR_129_A VAL_182_A SER_236_A MET_463_A CYS_697_A PHE_741_A GLN_789_A LEU_469_A
ALA_130_A THR_189_A TYR_237_A CYS_464_A GLN_698_A PHE_745_A ASN_790_A VAL_472_A
LEU_131_A PHE_192_A TYR_238_A ASP_465_A ALA_699_A TYR_748_A ASN_791_A CYS_697_A
ARG_132_A CYS_193_A SER_239_A GLN_468_A VAL_700_A LEU_749_A VAL_792_A VAL_700_A
HIS_133_A VAL_204_A LEU_240_A LEU_469_A THR_701_A HIS_752_A THR_701_A
PHE_134_A LEU_205_A LEU_241_A PHE_471_A ALA_702_A PHE_753_A VAL_704_A
THR_141_A THR_206_A PRO_243_A VAL_472_A ASN_703_A MET_755_A ASN_705_A
LEU_142_A LEU_207_A ILE_244_A VAL_475_A VAL_704_A ILE_757_A LEU_708_A
ILE_145_A ASP_208_A LEU_245_A TYR_479_A ASN_705_A ALA_762_A TYR_732_A
LEU_146_A ASN_209_A THR_246_A MET_615_A LEU_707_A VAL_764_A TYR_788_A
PHE_165_A TRP_216_A LEU_247_A TRP_617_A LEU_708_A TYR_770_A GLN_789_A

Residues in bold are the key residues that contribute to the formation of RdRp in complexes with carvedilol and its metabolites.