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. 2005 Apr;25(8):3305–3316. doi: 10.1128/MCB.25.8.3305-3316.2005

TABLE 1.

Putative Set2 homologs identified by PSI-BLAST searching with the SRI domain

Species Gene namea GI accession Sequence position of putative SRI domain % Identity/similarity to SRI domainb
S. cerevisiae Set2 6322293 619-718 NA
Candida albicans Ca019.9324 46435920 723-820 35/55
Homo sapiens HYPB 30410779 1956-2056 23/37
Mus musculus XP_135176 38090181 2393-2493 23/37
D. melanogaster CG1716 24641786 2262-2356 21/39
Neurospora crassa XP_322355 32403484 569-653 19/37
S. pombe SPAC29B12 2408044 703-778 17/42
a

All proteins identified contain a domain architecture similar to yeast Set2, including the AWS, SET, postSET and, in some cases, WW domains. It is notable that the putative SRI domains, as with Set2, are found in the C termini of these proteins.

b

Identity refers to the percentage of identical amino acids present between the yeast Set2 SRI domain and the putative SRI domain of the indicated homolog, while similarity indicates amino acid replacements that exhibit similar charge or hydrophobicity.