TABLE 1.
Species | Gene namea | GI accession | Sequence position of putative SRI domain | % Identity/similarity to SRI domainb |
---|---|---|---|---|
S. cerevisiae | Set2 | 6322293 | 619-718 | NA |
Candida albicans | Ca019.9324 | 46435920 | 723-820 | 35/55 |
Homo sapiens | HYPB | 30410779 | 1956-2056 | 23/37 |
Mus musculus | XP_135176 | 38090181 | 2393-2493 | 23/37 |
D. melanogaster | CG1716 | 24641786 | 2262-2356 | 21/39 |
Neurospora crassa | XP_322355 | 32403484 | 569-653 | 19/37 |
S. pombe | SPAC29B12 | 2408044 | 703-778 | 17/42 |
All proteins identified contain a domain architecture similar to yeast Set2, including the AWS, SET, postSET and, in some cases, WW domains. It is notable that the putative SRI domains, as with Set2, are found in the C termini of these proteins.
Identity refers to the percentage of identical amino acids present between the yeast Set2 SRI domain and the putative SRI domain of the indicated homolog, while similarity indicates amino acid replacements that exhibit similar charge or hydrophobicity.