TABLE 7.
Report of the fusion transcript between DHFR and MSH3 in the U-2OS/MTX300 cell line.
| Fusion name | DHFR-MSH3 |
|---|---|
| 5′ Gene | DHFR |
| 5′ Chromosome | 5 |
| 3′ Gene | MSH3 |
| 3′ Chromosome | 5 |
| Reported transcript 5′ | NM_001290354.2 |
| Reported transcript 3′ | NM_002439.5 |
| Translocation name | DHFR{NM_001290354.2}:r.1_929_MSH3{NM_002439.5}: r.1417_4443 |
| p-value | 0,00 |
| Z-score | 15,34 |
| Fusion crossing reads | 126 |
| 5′ Read coverage | 31.201 |
| 3′ Read coverage | 196 |
| 5′ position | 3′ position | Translocation name | Count |
|---|---|---|---|
| 80.633.876 | 80.725.452 | DHFR{NM_001290354.2}:r. 1_929_MSH3{NM_002439. | 126 |
| 5}:r.1417_4443 | |||
| 80.649.388 | 80.725.452 | DHFR{NM_001290354.2}:r. 1_686_MSH3{NM_002439. | 57 |
| 5}:r.1417_4443 | |||
| 80.637.882 | 80.725.452 | DHFR{NM_001290354.2}:r. 1_813_MSH3{NM_002439. | 13 |
| 5}:r.1417_4443 | |||
| 80.633.876 | 80.656.410 | DHFR{NM_001290354.2}:r. 1_929_MSH3{NM_002439. | 8 |
| 5}:r.314_4443 | |||
| 80.649.388 | 80.656.410 | DHFR{NM_001290354.2}:r. 1_686_MSH3{NM_002439. | 6 |
| 5}:r.314_4443 | |||
| 80.649.388 | 80.678.926 | DHFR{NM_001290354.2}:r. 1_686_MSH3{NM_002439. | 2 |
| 5}:r.1250_4443 | |||
| 80.633.876 | 80.767.932 | DHFR{NM_001290354.2}:r. 1_929_MSH3{NM_002439. | 2 |
| 5}:r.1973_4443 | |||
| 80.649.388 | 80.787.564 | DHFR{NM_001290354.2}:r. 1_686_MSH3{NM_002439. | 1 |
| 5}:r.2512_4443 | |||
| 80.649.388 | 80.854.129 | DHFR{NM_001290354.2}:r. 1_686_MSH3{NM_002439. | 1 |
| 5}:r.2890_4443 |