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. 2023 Nov 21;14:1307440. doi: 10.3389/fmicb.2023.1307440

Table 1.

Metadata of the seven African buffaloes included in the present study.

Mycobacterial culture Culture-independent PCR
Culture ID Tissue type Lesions score Age Gender Final culture RD-PCR result Spoligotyping Tissue - GeneXpert MTB/RIF ultra IS6110/IS1081 Ct-values
NB18193 Lung 2 Adult Female M. bovis SB1474 MTB DETECTED HIGH 15.8
NB18254 Retropharyngeal 2 Juvenile Female M. bovis SB1474 MTB DETECTED HIGH 15.1
NB18212 Lung 2 Juvenile Female M. bovis SB1474 MTB DETECTED LOW 22.5
NB18191 Parotid 1 Adult Female M. bovis SB1474 MTB DETECTED MEDIUM 16
NB18211 Tonsil 1 Adult Female M. bovis SB1474 MTB DETECTED MEDIUM 16.8
NB18246 Pooled head 0 Juvenile Female M. bovis SB1474 MTB DETECTED HIGH 15.6
NB18249 Lung 3 Adult Female M. bovis SB1474 MTB DETECTED MEDIUM 16.3

Sample source, speciation using conventional molecular methods, and results of GeneXpert MTB/RIF Ultra applied on tissue homogenates is reported.