TABLE 2.
ς32 protein (allele)b | Region affected | Ks (nM) | Maximum yield of transcripts (fmol) | % of core RNAP bindingc:
|
|
---|---|---|---|---|---|
Without ς70 | With ς70 | ||||
Wild type | |||||
ς32 C-his | None | ∼1.5 | ∼160 | >99 | ∼57 |
ς32 N-his | None | ∼1.7 | ∼162 | >99 | ∼53 |
Mutants | |||||
Class I | |||||
L161P (rpoH182) | 3.1 | ∼3 | ∼120 | >99 | ∼47 |
Class II | |||||
D179G (rpoH111) | 3.1 | ∼8 | ∼70 | ∼94 | ∼6 |
R243C (rpoH174) | 4.1 | ∼6 | ∼108 | ∼99 | ∼30 |
W244R (rpoH161) | 4.1 | ∼7 | ∼160 | ∼99 | ∼28 |
L245P (rpoH162) | 4.1 | ∼8 | ∼157 | >99 | ∼4 |
L270R (rpoH163) | 4.2 | ∼6 | ≥141 | >99 | ∼22 |
Class III | |||||
F136L (rpoH176) | RpoH box | ≥21 | ≥81 | ∼33 | ∼3 |
L278W (rpoH112) | 4.2 | ≥40 | ≥157 | ∼41 | ∼1 |
Δ178–201 (rpoH113) | 3 | NDd | ND | ∼28 | ∼1 |
In addition to the errors obtained from the experimental procedure in in vitro transcription and in immunoblot assays, there may be additional errors (±20%) from determination of protein concentrations by molar coefficient of extinction.
The mutants are classed according to their Kss and glycerol gradient sedimentation data (see Results).
The estimated percentage of core RNAP-bound ς32 was calculated by densitometry.
ND, not determined.