Skip to main content
Journal of Bacteriology logoLink to Journal of Bacteriology
. 1998 Mar;180(5):1148–1153. doi: 10.1128/jb.180.5.1148-1153.1998

Assembly of Both the Head and Tail of Bacteriophage Mu Is Blocked in Escherichia coli groEL and groES Mutants

Régis Grimaud 1,*, Ariane Toussaint 2
PMCID: PMC107001  PMID: 9495752

Abstract

Like several other Escherichia coli bacteriophages, transposable phage Mu does not develop normally in groE hosts (M. Pato, M. Banerjee, L. Desmet, and A. Toussaint, J. Bacteriol. 169:5504–5509, 1987). We show here that lysates obtained upon induction of groE Mu lysogens contain free inactive tails and empty heads. GroEL and GroES are thus essential for the correct assembly of both Mu heads and Mu tails. Evidence is presented that groE mutations inhibit processing of the phage head protein gpH as well as the formation of a 25S complex suspected to be an early Mu head assembly intermediate.


GroEL and its cofactor GroES belong to a subset of molecular chaperones called chaperonins. They control the folding of other polypeptide chains, protect them from aggregation, and regulate the assembly and disassembly of other protein complexes. Escherichia coli groEL and groES genes are essential at all temperatures (8). They form an operon which is constitutively expressed and is induced after heat shock. A 14-mer of the 57-kDa GroEL protomer associates with a 7-mer of the 10-kDa GroES protomer to form oligomers which act cooperatively in the folding of polypeptides. GroEL binds tightly to nonnative polypeptides. Upon association with GroES, by a mechanism involving ATP hydrolysis, GroEL discharges the polypeptide in a biologically active conformation (for reviews, see references 6, 17, 18, 29, and 42).

The first groE mutants were identified by their inability to grow bacteriophage λ or T4. Later, GroEL and GroES were demonstrated to also participate in the lytic cycle of many other bacteriophages. In all cases, the block caused by groE mutations is in morphogenesis. However, the steps affected differ from phage to phage. For λ and T4, the block is in head assembly (for reviews, see references 2 and 9), while for T5 and 186, tail assembly is the process requiring GroELS (21, 45).

Several head proteins, including gpB, are cleaved during λ head morphogenesis. The defective λ particles which accumulate in groEL or groES strains contain only unprocessed head proteins (19, 20, 22, 37). GroELS was shown to be necessary for the formation of the λ preconnector. This small 25S complex is the first detectable intermediate in λ head assembly (34). It consists of 12 subunits of λ protein gpB, is the precursor of the head-tail connector, and serves as the initiator for the assembly of the shell (26, 27, 35).

Like many other phages, Mu does not grow on some groEL and groES bacteria, although replication, transcription, and lysis occur normally in such hosts. This finding suggests that GroELS may also be involved in Mu morphogenesis (36). The assembly of Mu virions is under the control of 20 genes arranged in two clusters. The first contains the head genes D, E, H, I, T, and J; the second contains the tail genes K, L, M, Y, N, P, Q, V, W, R, S, and U (13, 14). gpT is the major coat protein. It forms the head shell (16, 38). gpD and gpE are suspected of being the Mu maturase components (5a). The protein encoded by gene H exists in two forms. One, gpH, has a molecular weight which corresponds to the size predicted from the nucleotide sequence of the H gene. It is found in a 25S complex which seems to be required for a very early step in head assembly. The second, gpH*, is found in heads and is derived from gpH by proteolytic cleavage of its C-terminal end. gpH processing occurs in assembled heads before DNA packaging (14).

We have analyzed Mu morphogenesis in groEL and groES hosts. Our results indicate that both head and tail assembly are affected. We have traced the main block in head morphogenesis to a defect in the assembly of the 25S complex and gpH processing.

MATERIALS AND METHODS

Media and general procedures.

Bacteria were grown in LB and titrated on LA plates containing 1.2% Difco agar (33). Phage lysates were diluted in SM buffer (40) and titrated on lawns of sensitive bacteria (0.1 ml of an overnight culture in LB) poured with 2.5 ml of 0.7% LA agar on LA plates. The phages and bacterial strains used are listed in Table 1. The purified GroEL and GroES proteins were gifts from O. Fayet.

TABLE 1.

Bacteriophages and bacterial strains used

Phage or strain Relevant genotype Reference or source
Phages
 Mucts62pAp1 31
 Mucts62Eam1006 24
 Mucts62Ham1043 24
 Mucts62Tam1913 38
 Mucts62Nam1041 24
 Mucts62Yam1027 25
 Mucts62Ham7100 25
 Mucts62Iam4037 25
Bacteria
 B178 galE (Sup0) 11
 C600 thi leu thr lacY tonA supE galK supE 3
 CG2241 B178groEL44 C. Georgopoulos
 CG2243 B178groEL140 C. Georgopoulos
 CG2244 B178groES619 C. Georgopoulos
 KT14 B178groES606 O. Fayet

In vitro reconstitution.

In vitro reconstitution experiments were performed as described by Giphart-Gassler et al. (13). The genotypes of the reconstituted phages were determined by marker rescue. Plaques of the phage whose genotype was to be tested were transferred with a toothpick to a mixed lawn of B178 and B178 lysogenic for one of the two amber mutants used in the in vitro reconstitution. The plates were incubated at 42°C. These tests showed a clear region of cell lysis if the reconstituted phage and the phage obtained by lysogen induction could recombine to yield wild-type phages.

Purification of phage particles.

Phage particles obtained by thermal induction of lysogens were concentrated by polyethylene glycol precipitation and purified by ultracentrifugation through a CsCl gradient, followed by another ultracentrifugation through a sucrose gradient as described by Grimaud (14). Ultracentrifugation of total protein extracts was carried out as described previously (14).

Immunoblotting.

Total protein extracts were prepared as described by Grimaud (14). Proteins were separated by sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) (28). Immunoblotting was performed as described by Geuskens et al. (12) except that electrotransfer was carried out with a Bio-Rad apparatus for 4 h at 100 V for small gels and overnight at 50 V for large gels. Anti-gpH* antibody was used at a 1,000-fold dilution. Anti-GroEL IgG (Epicentre) was used at 0.2 μg/ml.

RESULTS

Head-tail assembly is blocked in groEL and groES hosts.

Mu growth was tested on several groEL and groES hosts, among which some did and some did not allow the phage to form plaques (36a). Among the latter, two groEL strains (groEL44 and groEL140) and one groES strain (groES606) (described in Table 2) were chosen for further investigation of the role of the GroELS chaperonin in Mu morphogenesis. These strains were lysogenized with Mucts62pAp1 and induced at 42°C. Table 3 shows that under conditions where a wild-type lysogen produces lysates containing 2 × 109 phages/ml (data not shown), phage production from the groE lysogens was severely reduced, the number of plaque-forming phages varying from 2 × 105 to 6 × 106 phages/ml (i.e., 10−4 to 0.02 phage/bacterium).

TABLE 2.

Characteristics of groEL and groES mutants

groE allele(s) Codon Sequence of mutations Amino acid change Thermosensitivity Reference
L44 ς70-35 region TGGTCA--TGGTTA Growth at 42°C severely impaired; does not grow at 43°C; restoration of growth by overexpression complete at 42°C and partial at 43°C 43
Downstream groES stop TCC--TTC
191 GAA--GGA Glu→Gly
L140 201 TCT--TTT Ser→Phe Grows at 42°C but not at 43°C; growth at 43°C restored by overexpression 43
S606 and S619 24 GGC--GAC Gly→Asp Growth at 42°C severely impaired; does not grow at 43°C; growth at 42 and 43°C restored by overexpression 30

TABLE 3.

Reconstitution between groE lysates and tail or head donor lysatesa

Allele Titer on C600 (sup) (PFU/ml) % Wild-type phages in recon- stituted lysates Control heads + tails (108)
EL140 3 × 106
EL140 + heads 1.7 × 107 76 6
EL140 + tails 8 × 106 100
EL44 6 × 106
EL44 + heads 5 × 107 62 6
EL44 + tails 2.3 × 107 100
ES606 1.6 × 105
ES606 + heads 1.9 × 107 9 1.7
ES606 + tails 1 × 106 100
EL140 1.6 × 105
EL140 + heads + tails 8.1 × 107 1
a

The efficiency of reconstitution of infectious phages from head donor and tail donor lysates was variable (108 to 8 × 108 phages/ml), probably due to the instability of head and tail donor lysates previously reported by Giphart-Gassler et al. (13). Variations in the titer of groE lysates alone could reflect the fact that cultures were not always induced at exactly the same optical density: to avoid any delay between culture lysis and use of the lysate in reconstitution assays, cultures had to lyse simultaneously and hence to be induced at the same time rather than at the same optical density. All experiments were repeated at least three times. The values shown here are those from the most representative experiments. groE lysates were obtained by growing Mucts62pAp1 on B178groEL140 (EL140), B178groEL44 (EL44), or B178groES606 (ES606). Head donor and tail donor lysates were obtained by growing Mucts62Lam1007 and Mucts62Tam1913, respectively, on B178. The proportion of Am+ phages in reconstituted lysates was determined by stabbing isolated plaques on lawns of B178 (Sup0) and C600 (supE). At least 50 plaques were tested in each experiment. 

In experiments where infectious particles were reconstituted in vitro by mixing a lysate produced by a head gene mutant (i.e., tail donor) with one produced by a tail gene mutant (i.e., head donor), Giphart-Gassler et al. (13) have shown that like other tailed bacteriophages, Mu assembles its heads and tails separately. These then join to form complete infectious virions. We used the same in vitro reconstitution assay to see which process or processes, i.e., head assembly, tail assembly, or both, is (are) deficient in groE strains. Mucts62pAp1 lysates were prepared on each of several groEL and groES hosts (groE lysates). They were mixed with either a tail or a head donor lysate obtained by growing head mutant Mucts62Tam1913 or tail mutant Mucts62Lam1007 on a Sup0 strain. The results, summarized in Table 3, show that when either heads or tails were added to a groE lysate, the number of plaque-forming phages always increased (by a factor of 2, to over 100). Always, however, such phages remained 10 to over 100 times less abundant than in control experiments where the head and tail donor lysates were mixed together. To test whether the groE lysates contain some inhibitory factor preventing the normal joining of fully functional heads and tails, we grew Mucts62pAp1 on the groEL140 host and mixed the resulting lysate with both head and tail donor lysates. The level of reconstitution was exactly the same as in the control experiment where no groE lysate was added (Table 3). The simplest interpretation of the reduced reconstituted phage yields obtained with groE lysates and heads or tails is that GroEL and GroES are required for both head and tail morphogenesis.

Reconstituted phages have the genotype of the head donor. We took advantage of this property to identify the true head donor in reconstitution experiments where a head donor lysate was mixed with groE lysates. Phages whose heads come from the groE lysate should be Am+; those whose heads come from the head donor lysate should be amber. Table 3 shows that there were both amber and Am+ particles among the reconstituted phages, the latter representing 9 to 76% of the reconstituted population. The presence of reconstituted amber phages indicated that the groE lysates contained some free active tails. The production of Am+ phages suggested that groE lysates contained unstable or/and incomplete and hence noninfectious particles with a Mucts62pAp1 genome that were rescued upon addition of a head donor lysate. Rescue could result from the addition of one or more factors present in the added lysate and coming from either the phage (e.g., proteins such as accessory proteins involved in the stabilization of the capsid, tail fiber proteins which are normally added after head-tail joining) or the bacterial host (e.g., GroEL and GroES). We tested the tail fiber hypothesis by looking for production of Am+ particles after adding heads produced by a MuSam tail fiber mutant (15) to a groE lysate. Am+ phages were as abundant as with other head or tail donor lysates (data not shown). This ruled out an involvement of tail fiber proteins. We also tested the possibility that Am+ phage production resulted from the addition of GroELS present in the head donor lysate. Addition of purified GroEL and/or GroES to a groE lysate did not increase the formation of Am+ phages (data not shown).

We next attempted to test head and tail morphogenesis separately in groE hosts. Three tail mutants (Mucts62Lam1007, Mucts62Nam1041, and Mucts62Yam1027) and three head mutants (Mucts62Ham7100, Mucts62Iam4037, and Mucts62 Tam1913) were grown on the groEL140 strain and on the groES619 strain. Each resulting lysate was mixed with either a head donor (Lam1007) or a tail donor (Tam1913) lysate grown on a Sup0 GroE+ host. Table 4 shows that each head mutant grown on a groE host supplied tails as well as the control tail donor lysate did. In the reverse case, heads provided by a tail mutant grown on groE allowed for 2- to 20-fold less efficient reconstitution compared to the control head donor lysate. Thus active tails were produced in the groE host provided head assembly was blocked, but head assembly remained partially blocked in the absence of tail assembly.

TABLE 4.

Reconstitution of infectious phages from head or tail mutants grown in groE hostsa

Strain Titer on C600 (sup) (PFU/ml) Genotype of reconstituted particles Control heads + tails (108)
Head mutants
 EL140Ham <102
 EL140Ham + heads 1 × 108 Lam 5
 EL140Ham + tails <102
 EL140Iam <102
 EL140Iam + heads 4 × 108 Lam 5
 EL140Iam + tails <102
 EL140Tam <102
 EL140Tam + heads 2 × 108 Lam 1.6
 EL140Tam + tails <102
 ES619Ham <102
 ES619Ham + heads 8.1 × 107 Lam 1
 ES619Ham + tails <102
 ES619Iam <102
 ES619Iam + heads 8.4 × 108 Lam 8
 ES619Iam + tails <102
 ES619Tam <102
 ES619Tam + heads 4 × 108 Lam 3
 ES619Tam + tails <102
Tail mutants
 EL140Lam <102
 EL140Lam + heads <102 1.6
 EL140Lam + tails 1.7 × 107 Lam
 EL140Yam <102
 EL140Yam + heads <102 3
 EL140Yam + tails 5 × 107 Yam
 EL140Nam <102
 EL140Nam + heads <102 1.6
 EL140Nam + tails 1.8 × 107 Nam
 ES619Lam <102
 ES619Lam + heads <102 1
 ES619Lam + tails 4.7 × 107 Lam
 ES619Yam <102
 ES619Yam + heads <102 8
 ES619Yam + tails 4.4 × 107 Yam
 ES619Nam <102
 ES619Nam + heads <102 8
 ES619Nam + tails 7.1 × 107 Nam
a

The efficiency of reconstitution of infectious phages from head donor and tail donor lysates was variable (108 to 8 × 108 phages/ml), probably due to the instability of head and tail donor lysates previously reported by Giphart-Gassler et al. (13). Variations in the titer of groE lysates alone could reflect the fact that cultures were not always induced at exactly the same optical density: to avoid any delay between culture lysis and use of the lysate in reconstitution assays, cultures had to lyse simultaneously and hence to be induced at the same time rather than at the same optical density. All experiments were repeated at least three times. The values shown here are those from the most representative experiments. Head mutants used were Mucts62Iam4037, Mucts62Tam1913, and Mucts62Ham7100; tail mutants were Mucts62Lam1007, Mucts62Yam1027, and Mucts62Nam1041. Lysates of these phages were prepared by growing them on B178groEL140 and B178groES619 (groES619 is allelic with groES606 [7a]). See Materials and Methods for determination of genotypes of the reconstituted phages. In all cases, titers on B178 (Su0) were <102 PFU/ml. 

groE lysogens produce free tails and empty heads.

To further characterize the defect in Mu morphogenesis, we purified, on CsCl and sucrose gradients, the particles present in Mucts62pAp1 lysates obtained after thermal induction of groEL or groES lysogens (see Materials and Methods for the detailed protocol). Only particles with a 1.3-g/ml density, i.e., tails and/or empty heads (16), were detected. Sucrose gradient fractions were analyzed by SDS-PAGE, which enabled us to further distinguish defective heads (identified by the presence of gpT, the major head protein) from tail-related particles (identified by the presence of gpL, the major tail protein). All lysates contained head-related particles with a sedimentation coefficient of 100S, i.e., particles sedimenting like empty heads. Tail-related particles with a normal 90S sedimentation coefficient were also detected (Fig. 1A) (14).

FIG. 1.

FIG. 1

Protein composition of Mu particles produced on groE hosts. (A) Sedimentation profiles of Mu particles produced by B178groEL140(Mucts62pAp1). Phage particles were isolated on CsCl gradients at a 1.3-g/ml density and run on a 10 to 50% (wt/wt) sucrose gradient at 45,000 rpm for 60 min at 5°C in a Beckman SW50.1 rotor. The sedimentation coefficients were estimated as described in reference 32. ——, relative percentage of gpT; –––, relative percentage of gpL. The relative amounts of gpT and gpL in each fraction were determined by scanning Coomassie blue-stained SDS-polyacrylamide gels (see Materials and Methods for details). Results for B178groES606 (Mucts62pAp1) and B178groEL44(Mucts62pAp1) were the same as for B178groEL140(Mucts62pAp1) and are therefore not shown. Sedimentation is from left to right. (B) Fractions containing the head peaks as identified in panel A were analyzed by SDS-PAGE (12.5% gel). The faint bands around 60 kDa were not present in all preparations and were thus probably contaminants. Lane 1, head peak fraction (no. 10) produced by B178groEL44 (Mucts62pAp1); lane 2, head peak fraction (no. 10) produced by B178groEL140(Mucts62pAp1); lane 3, head peak fraction (no. 10) produced by B178groES606(Mucts62pAp1).

The protein composition of the particles present in the head peak fractions of the sucrose gradients was investigated by SDS-PAGE (Fig. 1B). Empty heads and tails had very similar sedimentation coefficients and did not separate well. The head peak fractions displayed gpL and two tail proteins (average molecular size, 38 kDa) (Fig. 1B) (13) in addition to gpT. The protein composition of the tails present in groE lysates was thus no different from that of tails in wild-type lysates. gpT was the only head protein present in the groE lysates. Previous analysis (14) showed that complete Mu heads and most Mu empty heads contain both gpT and gpH*, a processed form of gpH. The empty heads produced in groE hosts showed no evidence of any gene H product (Fig. 1B). This was confirmed by immunoblotting analysis with anti-gpH* antibody of the same gradient fractions (data not shown).

To test whether the absence of gene H products in groE heads was due to a defect in gpH synthesis or gpH incorporation into the head, we probed total proteins obtained from induced groE lysogens with anti-gpH* antibody. gpH was detected in all extracts, whether derived from groEL or from groES strains lysogenic for Mucts62pAp1 (Fig. 2). However, the processed form gpH* was always much less abundant in groE extracts. B178groEL140(Mucts62pAp1) (Fig. 2, lane 3) and B178groEL44(Mucts62pAp1) (Fig. 2, lane 2) displayed a small amount of gpH*, while in B178groES606(Mucts62pAp1) (Fig. 2, lane 1), gpH* was not detectable. Synthesis of gpH was thus normal in groE hosts, but gpH processing and incorporation into the head did not proceed correctly.

FIG. 2.

FIG. 2

Immunoblotting analysis of proteins synthesized in groE lysogens. Proteins were extracted from induced lysogens and separated on denaturing gels (12.5% acrylamide). The gels were probed with anti-gpH* as described in Materials and Methods. About 8 μg of protein was loaded in each lane. Lanes: 1, B178groES606(Mucts62pAp1); 2, B178groEL44(Mucts62pAp1); 3, B178groEL140(Mucts62pAp1); 4, B178(Mucts62pAp1); 5, B178.

The groEL44 mutant has one mutation in the −35 region of the ς70 promoter of the groELS operon (Table 2). This mutation should play no major role in the phenotype of this mutant, as expression of the groE operon is mostly under the control of the ς32 promoter at temperatures between 30 and 43°C (44). In addition, groEL44 thermoresistant revertants which retained the promoter mutation were isolated (43). To check that in our experiments expression of the groELS operon was not reduced by the promoter mutation, we used immunoblotting with anti-GroEL antibody to determine the amount of GroEL protein in our groEL44-derived strains. It was the same as that of GroEL in wild-type strains (data not shown).

groE mutations block an early step of Mu head assembly.

gpH was shown to be part of a 25S complex appearing as a likely very early intermediate in Mu head assembly (14). We looked for the presence of this complex in wild-type and groE strains lysogenic for Mucts62pAp1. Crude extracts of the induced lysogens were loaded on sucrose gradients. After centrifugation, the gradients were fractionated and fractions were analyzed by immunoblotting with anti-gpH* antibody. In wild-type extracts (Fig. 3A), gpH migrated to the top of the gradient with unassembled materials (fraction 1) and to the position of the 25S complex (fractions 9 and 10). gpH* was found only at the bottom of the gradient (fraction 20). Fraction 20 was previously shown to contain also the Mu coat protein gpT. Most likely, only complete virions and head-related particles with a high sedimentation velocity migrate to that position (14). The situation in groE extracts was clearly different. gpH was present only in the top fractions (fraction 1) of the gradient (see Fig. 3B), indicating that in the groE strains, gpH incorporation into the 25S complex does not proceed normally. Very low amounts of gpH* could be seen in some groE extracts (Fig. 2), which led us to check the sucrose gradient fractions for the presence of the gpH truncated form. Although a low amount of gpH* sometimes appeared in the top fractions, despite several attempts, it could never be detected in the bottom of the gradients (data not shown). This finding suggested that in groE strains, gpH* was not associated with head-related structures and hence that gpH was not cleaved along the proper assembly pathway.

FIG. 3.

FIG. 3

Sedimentation analysis of particles present in induced groE lysogens. Total protein extracts prepared after induction of lysogens were run on a 10 to 40% (wt/wt) sucrose gradient at 50,000 rpm for 3 h at 5°C in a Beckman SW50.1 rotor. The gradients were fractionated from top to bottom, and the fractions were analyzed by immunoblotting with anti-gpH*. (A) B178(Mucts62pAp1) extract; (B) B178groEL140(Mucts62pAp1) extract. Sedimentation is from left to right. The cross-reacting band present in fractions 2 and 3 was previously observed in extracts prepared from nonlysogenic bacteria grown at 32°C and shifted to 42°C. The other cross-reacting band present in fraction 8 was identified as GroEL by immunoblotting with anti-GroEL antibodies (data not shown).

DISCUSSION

With Mu, both head and tail assembly are affected in groE hosts.

Our in vitro reconstitution experiments (Tables 3 and 4) show that only few active heads and tails are produced when Mu multiplies in groEL or groES hosts, suggesting that the GroELS chaperonin is required for the correct assembly of Mu heads and tails. This contrasts with observations on other phages where either head or tail assembly is affected (head assembly for λ, T4, and HK97; tail assembly for 186 and T5) (2, 5, 9, 21, 45).

λ and T4 mutants which have recovered the ability to form plaques on groE hosts can be readily isolated at frequencies ranging from 10−6 to 10−7 (10, 11). Yet, despite the use of various mutagens and several different groEL and groES alleles, we failed to find similar Mu mutants. This result is consistent with both Mu head and Mu tail assembly being blocked in groE hosts, as more than one mutation in Mu might then be required to overcome the groE defect, and double mutants might be too rare to be detected.

The major effect of groE mutation on Mu head assembly is at the level of the Mu head protein gpH.

In Mu lysates prepared on groE hosts, we identified empty heads and inactive free tails. The defect in tails remains to be elucidated since they appeared unchanged in all of our analyses. The presence of empty heads suggests that head assembly is blocked before DNA packaging. Contrary to what happens in a GroE+ host, the head protein gpH, although produced in a normal amount, does not assemble into a 25S complex, is not efficiently processed into its cleaved gpH* form, and is not incorporated into heads. This assembly defect is similar to that observed with MuHam mutants such as MuHam7100 which express no gpH and do not assemble the 25S complex (14, 16). Since this complex seems to be an early head assembly intermediate (14), blocking its formation would block gpH incorporation in the head and hence gpH processing which occurs only in assembled heads. groE mutations thus appear to cause a major and specific block in head assembly at the level(s) which involves gpH.

The role of GroELS in phage head assembly has been studied in great detail with phages HK97 and λ. The HK97 coat protein gp5 aggregates in groE hosts. A complex between GroEL and gp5 was isolated and used in vitro to show that GroELS promotes gp5 folding (5, 41). During λ head assembly, GroELS specifically interacts with gpB. Mutations bypassing the groE mutations have been found in gene B, and a biologically active GroEL-gpB complex has been identified (10, 11, 39). In these two cases, groE mutations cause a specific defect because the chaperonin is required to activate one particular head protein. The situation for Mu head appears similar since our results suggest that Mu gpH requires GroELS to assume its functional state. In groE hosts, because of delayed or incorrect folding, gpH would not be available for head assembly, and hence the resulting defect appears similar to that observed with mutant Mu phages which express no gpH.

It was proposed earlier that gpH could be a functional homolog of the λ gpB portal protein (14). The results cited above support that hypothesis and the similarities that exist between Mu and λ head assembly pathways.

How groE mutations can affect the production of native polypeptides and block Mu assembly.

Mu lysates grown on groE hosts, although containing empty heads similar to those produced by MuHam mutants, also contain large amounts of defective free tails and smaller quantities of infectious phages, active free tails, and particles which become active upon combination with either head or tail donor lysates. In MuHam mutant lysates, in vitro reconstitution experiments did not provide any evidence for the existence of other types of phage-related particles besides empty heads (our unpublished results). The effect of groE mutations on Mu assembly thus cannot result from the sole absence of active gpH. The diverse defective particles produced, rather, reflect a requirement for GroELS at several morphogenetic steps or a deleterious effect of inactive gpH on several assembly steps. A direct effect of groE mutation on several morphogenetic steps implies that the chaperonin is required not only for the folding of gpH. This view is perfectly compatible with the properties of GroELS. Chaperonins play a general role in protein folding and seem to be required for the folding of many polypeptides. Horwich et al. (23) found that in bacteria lacking GroEL activity, 30% of the newly synthesized proteins aggregate. More recently, the flux of newly synthesized polypeptides through the chaperonin has been investigated. Under nonstress conditions, 10 to 15% of all newly synthesized polypeptides interact with GroEL (7). It is thus very likely that several Mu morphogenetic proteins require GroELS to reach their native state.

Among the different Mu-related particles produced in groE strains, the minor defective types likely derive from intermediates which escaped the major early defects in assembly of the 25S complex. These less abundant defective particles might also reflect a weaker dependence on GroELS of other phage proteins required for later assembly steps.

The groE mutants that we used in our experiments were characterized in great detail. Zeilstra-Ryalls and coworkers (43) showed that groEL140 and groEL44 strains which are thermosensitive for growth will grow at the nonpermissive temperature provided that the mutant proteins are overproduced. This finding suggests that the mutations, rather than knocking out the chaperonin’s ability to fold the substrate protein correctly, decrease the folding rate. Biochemical analysis of the GroEL140 protein confirmed that it still binds substrate polypeptides normally but releases them abnormally slowly (1). Phage morphogenesis is known to require the assembly, in the right sequence, of a controlled amount of intermediates (4). If in groE strains the folding of some morphogenetic polypeptides is slowed down, the normal progress of the assembly steps will be disrupted. In phage λ, ɛ mutants, some of which carry a mutation in gene E, overcome the groE defect (11, 39). To account for this observation, it was proposed that in groE hosts, assembly of phage particles aborts because the slower release of the active form of one component disrupts the balance between this component and other morphogenetic proteins. By decreasing the rate of synthesis of gpE, the ɛ mutation would restore the balance between the slowly released component and gpE and hence restore assembly (11, 39). A similar process could account for the partial restoration of head assembly and total restoration of tail morphogenesis which we observed upon growing Mu tail or head mutants in a groE host. Very large quantities of late phage proteins are produced during the lytic cycle. In groE mutants, delayed release of GroEL-bound peptides could limit the amount of chaperonin available and hence the production of morphogenetic proteins competent for assembly. If production of either head or tail components is blocked (e.g., by an am mutation), more chaperonin would become available for those assembly steps which heavily rely on it.

Recently, the dependence on the chaperonin for folding of newly synthesized proteins has been investigated in E. coli (7). Three classes of proteins were distinguished: (i) a minor class consists of mostly small polypeptides which do not bind to GroEL; (ii) a second class includes the majority of the proteins which are largely independent of the chaperonin although about 5% of each of them bind to GroEL; and (iii) 10% of the newly synthesized polypeptides with sizes ranging between 25 and 55 kDa are strictly dependent on GroEL for their folding. In our study, the Mu gpH protein appears to strongly depend on GroELS for function and hence would belong to the third class. Other Mu morphogenetic proteins seem to be affected by groE mutations to a lesser extent. These could belong to the second class, and only a small fraction of them would rely on GroEL for folding. In groE mutants, most gpH would be nonfunctional, leading to the accumulation of defective heads. Few functional assembly intermediates could be formed despite that primary block and proceed to further assembly steps which, depending on whether they do or do not rely on proteins belonging to the second class, will or will not proceed normally in the groE strain. This could lead to the formation of the minor types of defective particles that we observed. Our results are thus consistent with the view that the role of GroELS in Mu assembly mimics the general role of the chaperonin in the host bacterial cell.

ACKNOWLEDGMENTS

We thank C. Georgopoulos for helpful discussions and for providing bacterial strains, O. Fayet for the gift of GroE proteins, and M. Pato for his contribution to the initial part of this work.

This work was carried out with support from the Fonds National de la Recherche Scientifique and the Brachet Stiftung. R.G. was a fellow of the Ministère de la Recherche et de l’Enseignement Supérieur (France); A.T. is a fellow of the Directeur de Recherche from the Fonds National de la Recherche Scientifique (Belgium).

REFERENCES

  • 1.Baneyx F, Gatenby A. A mutation in GroEL interferes with protein folding by reducing the rate of discharge of sequestered polypeptides. J Biol Chem. 1992;267:11637–11644. [PubMed] [Google Scholar]
  • 2.Black L W, Showe M K. Morphogenesis of the T4 head. In: Mathews C K, Kutter E M, Mosig G, Berger P B, editors. Bacteriophage T4. Washington, D.C: American Society for Microbiology; 1983. pp. 219–245. [Google Scholar]
  • 3.Campbell A. Sensitive mutants of bacteriophage λ. Virology. 1961;14:22–23. doi: 10.1016/0042-6822(61)90128-3. [DOI] [PubMed] [Google Scholar]
  • 4.Casjens S R, Hendrix R W. Control mechanism in dsDNA bacteriophage assembly. In: Calendar R, editor. The bacteriophages. Vol. 1. New York, N.Y: Plenum Press; 1988. pp. 15–91. [Google Scholar]
  • 5.Ding Y, Duda R L, Hendrix R W, Rosenberg J M. Complex between chaperonin GroEL and the capsid protein of bacteriophage HK97. Biochemistry. 1995;34:14918–14931. doi: 10.1021/bi00045a037. [DOI] [PubMed] [Google Scholar]
  • 5a.Dubow, M. Personal communication.
  • 6.Ellis P, editor. The chaperonins. Orlando, Fla: Academic Press; 1996. [Google Scholar]
  • 7.Ewalt K L, Hendrick J P, Houry W A, Hartl F U. In vivo observation of polypeptides flux though the bacterial chaperonin system. Cell. 1997;90:491–500. doi: 10.1016/s0092-8674(00)80509-7. [DOI] [PubMed] [Google Scholar]
  • 7a.Fayet, O. Personal communication.
  • 8.Fayet O, Ziegelhoffer T, Georgopoulos C P. The groES and groEL heat shock genes of Escherichia coli are essential for bacterial growth at all temperatures. J Bacteriol. 1989;171:1379–1385. doi: 10.1128/jb.171.3.1379-1385.1989. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 9.Georgopoulos C P, Tilly K, Casjens S. Lambdoid phage head assembly. In: Hendrix R W, Robert J W, Stahl F W, Weisberg R A, editors. Lambda II. Cold Spring Harbor, N.Y: Cold Spring Harbor Laboratory; 1983. pp. 279–304. [Google Scholar]
  • 10.Georgopoulos C P, Hendrix R W, Kaiser A D, Wood W B. Role of the host cell in bacteriophage morphogenesis: effects of a bacterial mutation on T4 head assembly. Nat New Biol. 1972;239:38–41. doi: 10.1038/newbio239038a0. [DOI] [PubMed] [Google Scholar]
  • 11.Georgopoulos C P, Hendrix R W, Casjens S R, Kaiser A D. Host participation in bacteriophage lambda head assembly. J Mol Biol. 1973;76:45–60. doi: 10.1016/0022-2836(73)90080-6. [DOI] [PubMed] [Google Scholar]
  • 12.Geuskens V, Vogel J L, Grimaud R, Desmet L, Higgins N P, Toussaint A. Frameshift mutation in bacteriophage Mu repressor gene can confer a trans-dominant virulent phenotype to the phage. J Bacteriol. 1991;173:6578–6585. doi: 10.1128/jb.173.20.6578-6585.1991. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 13.Giphart-Gassler M, Wijffelman C, Reeve J. Structural polypeptides and products of late genes of bacteriophage Mu: characterization and functional aspects. J Mol Biol. 1981;145:139–163. doi: 10.1016/0022-2836(81)90338-7. [DOI] [PubMed] [Google Scholar]
  • 14.Grimaud R. Bacteriophage Mu head assembly. Virology. 1996;217:200–210. doi: 10.1006/viro.1996.0107. [DOI] [PubMed] [Google Scholar]
  • 15.Grundy F, Howe M. Involvement of the G segment in bacteriophage Mu tail fiber biosynthesis. Virology. 1984;134:296–317. doi: 10.1016/0042-6822(84)90299-x. [DOI] [PubMed] [Google Scholar]
  • 16.Grundy F, Howe M. Morphogenetic structures present in lysates of amber mutants of bacteriophage Mu. Virology. 1985;143:485–504. doi: 10.1016/0042-6822(85)90388-5. [DOI] [PubMed] [Google Scholar]
  • 17.Hartl F U, Martin J. Protein folding in the cell: the role of molecular chaperones Hsp70 and Hsp60. Annu Rev Biophys Biomol Struct. 1992;21:293–322. doi: 10.1146/annurev.bb.21.060192.001453. [DOI] [PubMed] [Google Scholar]
  • 18.Hendrick J P, Ulrich-Hartl F. Molecular chaperon function of heat-shock proteins. Annu Rev Biochem. 1993;62:349–384. doi: 10.1146/annurev.bi.62.070193.002025. [DOI] [PubMed] [Google Scholar]
  • 19.Hendrix R W, Casjens S R. Protein fusion: a novel reaction in bacteriophage lambda head assembly. Proc Natl Acad Sci USA. 1974;71:1451–1455. doi: 10.1073/pnas.71.4.1451. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 20.Hendrix R W, Casjens S R. Assembly of bacteriophage lambda heads: protein processing and its genetic control in petit λ assembly. J Mol Biol. 1975;91:187–199. doi: 10.1016/0022-2836(75)90159-x. [DOI] [PubMed] [Google Scholar]
  • 21.Hocking S M, Egan J B. Genetic studies of coliphage 186. Genes associated with phage morphogenesis. J Virol. 1982;129:1056–1067. doi: 10.1128/jvi.44.3.1056-1067.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Hohn T, Flick H, Hohn B. Petit λ a family of particles from coliphage lambda infected cells. J Mol Biol. 1975;98:107–120. doi: 10.1016/s0022-2836(75)80104-5. [DOI] [PubMed] [Google Scholar]
  • 23.Horwich A L, Low K B, Fenton W A, Hirshfield I N, Furtak K. Folding in vivo of bacterial cytoplasmic proteins: role of GroEL. Cell. 1993;74:909–917. doi: 10.1016/0092-8674(93)90470-b. [DOI] [PubMed] [Google Scholar]
  • 24.Howe M M. Prophage deletion mapping of bacteriophage Mu-1. Virology. 1973;54:93–101. doi: 10.1016/0042-6822(73)90118-9. [DOI] [PubMed] [Google Scholar]
  • 25.Howe M M, O’Day K J, Schultz D W. Isolation of mutations defining five new cistrons essential for development of bacteriophage Mu. Virology. 1979;93:303–319. doi: 10.1016/0042-6822(79)90235-6. [DOI] [PubMed] [Google Scholar]
  • 26.Kochan J, Murialdo H. Lambda prohead assembly. II. Identification of biologically active intermediates. Virology. 1983;131:100–115. doi: 10.1016/0042-6822(83)90537-8. [DOI] [PubMed] [Google Scholar]
  • 27.Kochan J, Carrascosa J L, Murialdo H. Bacteriophage lambda preconnector: purification and structure. J Mol Biol. 1984;175:433–447. doi: 10.1016/0022-2836(84)90330-9. [DOI] [PubMed] [Google Scholar]
  • 28.Laemmli U K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970;227:680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
  • 29.Landry J L, Gierasch L M. Polypeptide interaction with molecular chaperones and their relationship to in vivo protein folding. Annu Rev Biophys Biomol Struct. 1994;23:645–669. doi: 10.1146/annurev.bb.23.060194.003241. [DOI] [PubMed] [Google Scholar]
  • 30.Landry S J, Zeilstra-Ryalls J, Fayet O, Georgopoulos C P, Gierash L M. Characterization of a functionally important mobile domain of GroES. Nature. 1993;364:255–258. doi: 10.1038/364255a0. [DOI] [PubMed] [Google Scholar]
  • 31.Leach D, Symonds N. The isolation and characterization of a plaque-forming derivative of bacteriophage Mu carrying a fragment of Tn3 conferring ampicillin resistance. Mol Gen Genet. 1979;172:179–184. doi: 10.1007/BF00268280. [DOI] [PubMed] [Google Scholar]
  • 32.McEwen C R. Table for estimating sedimentation through linear concentration gradients of sucrose solution. Anal Biochem. 1967;20:114–149. doi: 10.1016/0003-2697(67)90271-0. [DOI] [PubMed] [Google Scholar]
  • 33.Miller J H. Experiments in molecular genetics. Cold Spring Harbor, N.Y: Cold Spring Harbor Laboratory; 1972. [Google Scholar]
  • 34.Murialdo H. Early intermediates in bacteriophage lambda prohead assembly. Virology. 1979;96:341–367. doi: 10.1016/0042-6822(79)90094-1. [DOI] [PubMed] [Google Scholar]
  • 35.Murialdo H, Becker A. A genetic analysis of bacteriophage lambda prohead assembly in vitro. J Mol Biol. 1978;125:57–74. doi: 10.1016/0022-2836(78)90254-1. [DOI] [PubMed] [Google Scholar]
  • 36.Pato M, Banerjee M, Desmet L, Toussaint A. Involvement of heat shock proteins in bacteriophage Mu development. J Bacteriol. 1987;169:5504–5509. doi: 10.1128/jb.169.12.5504-5509.1987. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 36a.Pato, M., and A. Toussaint. Unpublished results.
  • 37.Ray P, Murialdo H. The role of the gene Nu3 in bacteriophage lambda head morphogenesis. Virology. 1975;64:247–263. doi: 10.1016/0042-6822(75)90096-3. [DOI] [PubMed] [Google Scholar]
  • 38.Shore S H, Howe M M. Bacteriophage Mu T mutants are defective in synthesis of the major head polypeptide. Virology. 1982;120:264–268. doi: 10.1016/0042-6822(82)90026-5. [DOI] [PubMed] [Google Scholar]
  • 39.Sternberg N. Properties of a mutant Escherichia coli defective in bacteriophage λ head formation (groE). II. The propagation of phage λ. J Mol Biol. 1973;76:25–44. doi: 10.1016/0022-2836(73)90079-x. [DOI] [PubMed] [Google Scholar]
  • 40.Weigle J M, Meselson M, Paigen K. Density alterations associated with transducing ability in the bacteriophage λ. J Mol Biol. 1959;1:379–386. [Google Scholar]
  • 41.Xie Z, Hendrix R W. Assembly in vitro of bacteriophage HK97 proheads. J Mol Biol. 1995;253:74–85. doi: 10.1006/jmbi.1995.0537. [DOI] [PubMed] [Google Scholar]
  • 42.Zeilstra-Ryalls J, Fayet O, Georgopoulos C P. The universally conserved GroE (Hsp60) chaperonins. Annu Rev Microbiol. 1991;45:301–325. doi: 10.1146/annurev.mi.45.100191.001505. [DOI] [PubMed] [Google Scholar]
  • 43.Zeilstra-Ryalls J, Fayet O, Baird L, Georgopoulos C P. Sequence analysis and phenotypic characterization of groEL mutations that block λ and T4 bacteriophage growth. J Bacteriol. 1993;175:1134–1143. doi: 10.1128/jb.175.4.1134-1143.1993. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Zhou Y N, Kusukawa N, Erickson J W, Gross C A, Yura T. Isolation and characterization of Escherichia coli mutants that lack the heat shock sigma factor (ς32) J Bacteriol. 1988;170:3640–3649. doi: 10.1128/jb.170.8.3640-3649.1988. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.Zweig M, Cummings D J. Cleavage of head and tail proteins during bacteriophage T5 assembly: selective host involvement in the cleavage of a tail protein. J Mol Biol. 1973;80:505–518. doi: 10.1016/0022-2836(73)90418-x. [DOI] [PubMed] [Google Scholar]

Articles from Journal of Bacteriology are provided here courtesy of American Society for Microbiology (ASM)

RESOURCES