Table 3.
Properties of the protein heterodimers studied. The significant length (number of sequences in cMSA / Size of both proteins) is indicated for each protein complex. As they are all lower than the required 0.7 for most DCA analysis in single proteins [23], we used our method, based on the local convolution of ECs, to reduce the number of false positives generated and highlight the most likely interacting partners [6].
| Protein size (AA) | Number of individual sequences | Number of sequences in cMSA | Sig. length | Sequence coverage | |
|---|---|---|---|---|---|
| INTS9 | 658 | 223 | 204 | 0.16 | 55 – 90% |
| INTS11 | 600 | 239 | |||
| INTS4 | 963 | 202 | 171 | 0.11 | 55 – 90% |
| INTS9 | 658 | 223 | |||
| INTS4 | 963 | 202 | 171 | 0.11 | 55 – 90% |
| INTS11 | 600 | 239 | |||
| CPSF100 | 782 | 179 | 138 | 0.1 | 55 – 90% |
| CPSF73 | 684 | 161 |