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. 2023 Nov 23;11:1285393. doi: 10.3389/fpubh.2023.1285393

Table 1.

An overview of the microbial diversity in different indoor environments (2017-2023).

S. No. Type of Indoor Environment/Region Source/Sample Microbial diversity References
1 Primary Schools; Malta Settled dust was collected using a vacuum, airborne dust collected using electrostatic dust fall collectors, and the floor dust was collected using ALK adaptors and filter cassettes fitted to vacuum cleaners Bacteria: Mycobacterium, Streptomyces
Fungi: Alternaria alternata, Aspergillus versicolor, Cladosporium herbarum, Trichoderma viride, and a larger fungal group comprising Penicillium/Aspergillus/Paecilomyces spp.
(137)
2 Healthcare facilities; Liguria, Veneto, Tuscany, Campania, Lazio, Apulia, Sardinia, and Sicily; Italy Air sample by active sampling using Surface Air System and Coriolis®μ, and passive sampling by settle plate method Selective detection of Legionella spp. including L. pneumophila (138)
3 Wolatia Sodo University Teaching and Referral hospital; Ethiopia Air sample by active sampling using a six-stage Anderson cascade impactor Selective isolation of multi-drug resistant Acinetobacter baumanii
and Pseudomonas aeruginosa
(139)
4 Hospital; Islamabad, Pakistan Air samples using personal air samplers Bacteria: Aerococcus viridans, Bacillus cereus, B. subtilis, Kocuria kristinae, K. rhizophila, K. rosia, Kytococcus sedantarius, Micrococcus luteus, M. terreus, Pseudomonas stutzeri, Staphylococcus aureus, S. cohnii
S. haemolyticus
Fungi: Alternaria alternata, Aspergillus flavus, A. fumigatus, A. niger, Cladosporium, Geotrichum, Penicillium, Ulocladium chartarum
(140)
5 Office Building; Gliwice, Poland Air sample using a six-stage Anderson cascade impactor Bacteria: Bacillus cereus, Enterococcus faecium, Gemella haemolysans, Janibacter anophelis/hoylei, Macrococcus brunensis, M. equipercicus, Micrococcus luteus, Staphylococcus xylosus (141)
6 Duke University hospital; Durham, North Carolina, United States Air sample using NIOSH BC 251 personal aerosol sampler Viruses: influenza A, influenza D, and adenovirus (142)
7 Glasshouses in a botanical garden; Jagiellonian University, Kraków, Poland Air sample using a six-stage Anderson cascade impactor Bacteria: Arthrobacter, Bacillus, Curtobacterium, Exiguobacterium,
Kocuria, Microbacterium, Micrococcus, Pseudomonas, Solibacillus
Fungi: Alternaria, Aspergillus, Cladosporium, Fusarium, Penicillium, Rhizomucor, Rhodotorula, Scopulariopsis, Trichoderma
(143)
8 University hospitals, super tertiary care hospitals, regional/general (tertiary care) hospitals, and national infectious disease institute; Central Thailand Air sample using a liquid impinger system Selective detection of Mycobacterium tuberculosis (144)
9 Historical museum; Egypt Active air sampling using volumetric Andersen 2-stage impactor and gravimetric air sample by settle plate method; dry deposited dust collected using a dust collector Fungi: Alternaria, Aspergillus fumigatus, A. niger, A. terreus, A. versicolor, Aureobasidium, Chaetomium, Cladosporium, Eurotium, Penicillium, Rhizopus, Stachybotarys, Ulocladium (145)
10 Public schools; Helsinki, and Vantaa, Finland Filter and settled dust sample, Air sample using RCS® High flow touch microbial air sampler, and endotoxin samples from floors using a vacuum cleaner Fungi: Aspergillus westerdijkiae, A. versicolor, A. flavus, Chaetomium globosum, Dichotomophilus, Fusarium, Penicillium chrysogenum, P. commune, P. expansum, Rhizopus oryzae, Trichoderma atroviride, T. citrinoviride, T. longibrachiatum, T. trixiae (146)
11 Healthcare and care facilities; Nancy, and Rennes, France Air sample using cyclonic liquid air sampler, Coriolis® μ Bacteria: Bacillus cereus, B. licheniformis, Kocuria, Micrococcus, Pantoea, Pseudomonas, Staphylococcus hominis, S. epidermidis, S. saprophyticus, S. chromogenes, Stenotrophomonas maltophilia
Fungi: Alternaria, Aspergillus, Cladosporium, Eurotium, Penicillium, Rhodotorula
(147)
12 Homes; Cincinnati, Ohio, United States Floor dust samples using vacuum cleaners Bacteria: Acinetobacter lwoffii, Alkanindiges illinoisensis, Coprococcus eutactus, Corynebacterium matruchotii, Dialister invisus, Lactococcus, Massilia, Pseudomonas, Staphylococcus aureus, Streptococcus
Fungi: Acrimonium fusidioides, A. illinoisensis, Candida parapsilosis, C. tropicalis, Epicoccum nigrum, Toxicladosporium irritans, Plectosphaerella oratosquillae, Phaeosphaeria podocarpi, Rhodotorula mucilaginosa
(148)
13 Three major hospitals; Kuwait Aerosol sample using a specialized sampler Bacteria: Haemophilus influenzae,
Mycoplasma pneumoniae, Streptococcus pneumoniae
Viruses: SARS CoV-2 virus, non-SARS-coronavirus strains HKU1 and NL-63, respiratory syncytial virus, human bocavirus, human rhinoviruses, human enteroviruses, influenza B virus
(149)
14 Detached house, townhouse, and apartment; Greater Copenhagen, Denmark Inhalable air fraction collected using Gesamtstaubprobenahme (GSP) conical inhalable samplers, and PM1 fraction collected using Triplex cyclones. Fungi: Acremonium strictum, Aspergillus. fumigatus, A. glaucus, A. niger, A. versicolor, Chaetomium globosum, Cladosporium cladosporioides, C. herbarum, C. sphaerospermum, Penicillium chartarum, P. expansum, Rhizopus stolonifer, Trichoderma viride, Ulocladium chartarum, Wallemia sebi (150)
15 University buildings; Johannesburg, South Africa HVAC-filtered dust and floor dust samples collected using sterile swabs Bacteria: Alcaligenes, Bacillus, Bradyrhizobium, Corynebacterium, Dietzia, Mesorhizobium, Mycobacterium, Paenochrobactrum, Pseudomonas, Rhodococcus (151)
16 Various hospital wards; Ardabil, Iran Air sample using an impinger Specific detection of SARS CoV-2 virus (152)
17 Gyms; Ardabadil city, Iran Air sample using the Anderson single-step sampler Bacteria: E. coli,
Pseudomonas, Staphylococcus
(153)
18 Maputo central hospital and microbiology laboratory of the University of Eduardo Mondlane faculty of medicine; Mozambique Air sample using passive method and surface swab samples Bacteria: Acinetobacter baumanii, Bacillus sp., Burkholderia cepacia, Citrobacter koseri, C. braakii, Coagulase-negative staphylococci, Cronobacter, Enterobacter amnigenus, E. cloaceae, Haemophilus parainfluenzae, Klebsiella pneumoniae, K. oxytoca, Moellerella wisconsensis, Moraxella lacunata, Pantoea sp., Pseudomonas luteola, Raoultella ornithinolytica, Serratia odorifera, S. ficaria, S. plymuthica, S. rubidaea
Fungi: Aspergillus flavus, A. niger, Fusarium verticillioides, Mucor sp., Paecilomyces variotii, Rhizopus
(154)
19 Shopping Malls; Xiamen, China Floor and escalator surface swab samples Bacteria: Acinetobacter baumanii, Enterobacter asburiae, E. cloacae, Erwinia, Leclercia adecarboxylata, Pantoea dispersa, Staphylococcus aureus
Fungi: Seasonal variations observed in fungal community composition with Eurotiomycetes, Saccharomycetes, and Wallemiomycetes dominating the summer samples and Tremellomycetes, Agaricomycetes, Microbotryomycetes, and Dothidiomycetes dominating the spring samples
(155)
20 Subway stations; Busan, South Korea; Boston, United States; Mexico City, Mexico; Moscow, Russia Surface swab samples Bacteria: Brevundimonas, Corynebacterium, Cutibacterium, Deinococcus, Dietzia, Janibacter, Kocuria, Lawsonella, Leuconostoc, Methylobacterium, Micrococcus, Rothia, Streptococcus, Sphingomonas, Staphylococcus, Stenotrophomonas (156)