Supplemental Table1. P-value threshold and related parameters on PRS construction .
Traits | P-threshold | Number of SNP | R2 |
---|---|---|---|
HbA1c | 5.0 × 10-8 | 102 | 0.0083587720365206 |
0.001 | 1523 | 0.0069292604848436 | |
0.01 | 5760 | 0.0061782942260876 | |
0.05 | 16637 | 0.0108040782866358 | |
0.1 | 26742 | 0.0111353862108406 | |
0.2 | 42845 | 0.0111962866537727 | |
0.3 | 56383 | 0.0102524876262533 | |
0.4 | 68077 | 0.0101184426932776 | |
0.5 | 78302 | 0.0092796911886064 |
Bold fonts in this table indicate the best fit and settings for our analysis. PRS, polygenic risk score.