TABLE 3.
Genome balance analysis of S. enterica serovar Typhi strains belonging to genome types 1 to 6a
Parameter | A+C+b
|
A−C+
|
A+C−
|
A−C−
|
||||
---|---|---|---|---|---|---|---|---|
Replichore 1 | Replichore 2 | Replichore 1 | Replichore 2 | Replichore 1 | Replichore 2 | Replichore 1 | Replichore 2 | |
Genome balancec | 0.491 | 0.508 | 0.505 | 0.495 | 0.589 | 0.410 | 0.604 | 0.395 |
Amt off-balance (kb)d | −42.5 | 42.5 | 25.5 | −25.5 | 432.5 | −432.5 | 500.5 | −500.5 |
No. of isolatese | 28 | 72 | 0 | 0 |
Genome types 1 to 6 have the fragment order I-CeuI-ABC(DEF)G; DEF can be in any order.
The orientation of fragments A and C as shown in Fig. 4.
Genome balance was determined from fragment sizes (Fig. 6).
See the Discussion for the method used to calculate the amount off-balance.
The number of strains in each type of orientation, as shown in Fig. 4.