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. 2023 Nov 22;10(6):066501. doi: 10.1117/1.JMI.10.6.066501

Table 2.

Summary of T1W MRI-based anonymization algorithms.

Anonymization algorithm Method of anonymization Description of algorithm Citation
Afni_deface Defacing Uses a precreated mask to modify the image by replacing the voxel values of the face and ears with zero Cox et al.28
Afni_reface Refacing Modifies the image by applying a scaled replacement “generic face” mask that was created by warping and averaging several public datasets; Modifies the same regions as Afni_deface Cox et al.28
FSL’s BET Skull-stripping A deformable model that makes an intensity-based estimation of the brain and nonbrain threshold, determines the center of gravity of the head and defines a sphere at that point, and expands until it reaches the brain edge Smith et al.32
AFNI’s 3Dskullstrip Skull-stripping Modified version of BET; uses additional processing such as nonuniformity correction and edge detection to minimize errors “AFNI: 3Dskullstrip,” National Institute of Mental Health29