Table 2.
Main characteristics of the longest (>2000 bp) scaffolds affiliated to RNA viruses: number and similarity of ORFs/proteins, closest relatives in the NCBI RefSeq/nr database, number of reads (TPM) per sample.
| Scaffold ID_Length (nt) | Number of ORFs | Similarity of ORFs with RefSeq Proteins | BLAST Hit_RefSeq (Virotype) | Virotype Taxa (Known Order or Family) | Host/Source Lineage | TPM per Sample | |||
|---|---|---|---|---|---|---|---|---|---|
| 57.58 | 59.60 | 61.62 | 63.64 | ||||||
| BM_458/8746 | 1 | 24.8 | Biomphalaria virus 3 | Picornavirales | Mollusca; Gastropoda | 550 | 0 | 0 | 3 |
| BM_632/8432 | 3 | 29.6–32.2 | Biomphalaria virus 1 | Picornavirales | Mollusca; Gastropoda | 250 | 0 | 1 | 183 |
| BM_935/8225 | 3 | 25.5–29 | Beihai picorna-like virus 101 | unclassified | /Arthropoda; Decapoda | 12 | 0 | 0 | 203 |
| BM_2164/5832 | 2 | 33.2 | Centovirus AC | Dicistroviridae | Insecta; Kerteszia | 0 | 116 | 0 | 0 |
| BM_7211/4124 | 2 | 28.1–39.3 | Beihai sobemo-like virus 15 | unclassified | /Arthropoda; Decapoda | 71 | 2376 | 1 | 192 |
| BM_7872/3857 | 4 | 30.6–49.2 | Sanxia water strider virus 14 | unclassified | /Insecta; Hemiptera | 10,958 | 14,615 | 13,680 | 23,072 |
| BM_9379/3384 | 3 | 38.3–45.3 | Tobacco necrosis virus D | Tombusviridae | Viridiplantae; Magnoliopsida | 91 | 323 | 31 | 112 |
| BM_12038/3224 | 4 | 32.4–67.3 | Changjiang tombus-like virus 1 | unclassified | /Arthropoda; Decapoda | 966,801 | 969,290 | 978,336 | 970,063 |
| BM_12938/3213 | 2 | 42–49.8 | Beihai picorna-like virus 15 | unclassified | /Mollusca; Octopoda | 1 | 0 | 0 | 64 |
| BM_10437/3187 | 3 | 31.4–43.0 | Changjiang tombus-like virus 12 | unclassified | /Arthropoda; Decapoda | 168 | 0 | 3 | 2 |
| BM_13788/3115 | 1 | 33.9 | Sclerophthora macrospora virus A | unclassified | Oomycota; Sclerophthora | 299 | 9 | 0 | 334 |
| BM_13383/3065 | 2 | 45.2–52.8 | Nodamura virus | Nodaviridae | Insecta; Diptera | 156 | 0 | 0 | 0 |
| BM_14418/3051 | 1 | 99.3 | Tiger puffer nervous necrosis virus | Nodaviridae | Vertebrata; Tetraodontiformes | 1 | 329 | 0 | 0 |
| BM_13689/2980 | 3 | 33.9–40.6 | Sanxia water strider virus 14 | unclassified | /Insecta; Hemiptera | 1 | 9 | 386 | 1 |
| BM_17066/2761 | 3 | 39.3–76.8 | Changjiang tombus-like virus 2 | unclassified | /Arthropoda; Decapoda | 387 | 0 | 0 | 1 |
| BM_15391/2722 | 3 | 39.3–46.8 | Sanxia water strider virus 14 | unclassified | /Insecta; Hemiptera | 0 | 16 | 417 | 3 |
| BM_18173/2610 | 2 | 47.3 | Leek white stripe virus | Tombusviridae | Viridiplantae; Liliopsida | 460 | 4 | 0 | 5 |
| BM_23235/2360 | 1 | 23.7 | Hubei tombus-like virus 30 | unclassified | /Arthropoda; Arachnida | 58 | 0 | 0 | 0 |