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. 2023 Oct 24;12:e87255. doi: 10.7554/eLife.87255
LRRK2 R1441G knock-in (A549) Sequences
sgRNA AAGAAGAAGCGCGAGCCUGG
Donor sequence AAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCCAGCCTGGAGGGAAAGACACAAAACCCTCTTGTGTTTGCTTTCAAA
Forward PCR primer (5'–3') AGGCATGAAGATGGGAAAGGA
Reverse PCR primer (5'–3') GGAACCCTCGCTTATTCAGGA
LRRK2 knock-out (A549) Sequences
sgRNA 1 GGGGACTGTCGACGGTGATCGGT
sgRNA 2 GGTCCTAAACCTGGTCGCAAAGA
Donor sequence n/a
Forward PCR primer (5'–3') AGTCCGCTGAGTCAGTTTCTTC
Reverse PCR primer (5'–3') GGGCTCTTCATCCCGTTTACA
VPS35 D620N knock-in (A549) Sequences
sgRNA GAUGGCAGCUAGCUGUGCUU
Donor sequence TGTTCACTAGGCATTTTCTCTGTATGAAGATGAAATCAGCAATTCAAAAGCACAGCTAGCTGCCATCACCTTGATCATTGGCACTTTTGA
Forward PCR primer (5'–3') GGCCATGACAACTGATCCCT
Reverse PCR primer (5'–3') GAGAGGGTGCAGCATGTTCT
Rab12 knock-out (A549) Sequences
sgRNA AUCAAACUGUAGAGCUAAG
Donor sequence n/a
Forward PCR primer (5'–3') GGGAGGTTATAGACACTGGTGC
Reverse PCR primer (5'–3') AACTGCTCCCCATGTGCAAG