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. 2023 Nov 23;4(4):102748. doi: 10.1016/j.xpro.2023.102748

Table 6.

Parameters used for the operation of the MaxQuant software

Parameter Value
Variable modifications Oxidation (M)
Acetyl (protein N-term)
Fixed modifications Carbamidomethyl (C)
Maximum number of modifications per peptide 5
Enzyme Trypsin
Maximum missed cleavages 2
Minimum peptide length 6