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. 2023 Nov 24;39(12):btad716. doi: 10.1093/bioinformatics/btad716

Table 6.

Experimental results achieved on typo corpora listed in Table 4.

GSC+
EHR
Method Precision Recall F1 Precision Recall F1
Exact matching 93.3 0.3 0.7 80.3 0.4 0.8
PhenoTagger 34.6 17.3 23.1 58.8 19.4 29.2
ClinPheno 28.8 12.3 17.2 43.2 17.2 24.6
Doc2HPO 34.1 7.7 12.6
Monarch Annotator 12.1 3.2 5.1
NCBO Annotator 12.5 3.32 5.2
TBLAT 96.0 24.7 39.3 98.5 40.7 57.6

Bolded values represent the best F1 score in class.