| Species-specific mutant collections |
Database of images and genome (MaizeDIG) |
https://maizedig.maizegdb.org/
|
| Mutant Variety Database |
https://nucleus.iaea.org/sites/mvd/SitePages/Home.aspx
|
| Plant Genome Editing Database |
http://plantcrispr.org/cgi-bin/crispr/index.cgi
|
| RIKEN Arabidopsis Genome Encyclopedia |
http://rarge-v2.psc.riken.jp/line
|
| TOMATOMA |
https://tomatoma.nbrp.jp/index.jsp
|
| Plant Editosome |
https://ngdc.cncb.ac.cn/ped/
|
| Traits and QTLs |
Gramene QTL |
https://archive.gramene.org/qtl/
|
| Wheatqtl |
http://www.wheatqtldb.net/
|
| GLOPNET |
http://bio.mq.edu.au/∼iwright/glopian.htm
|
| TRY database |
https://www.try-db.org/TryWeb/Home.php
|
| Ecological Flora of the Britain and Ireland |
http://ecoflora.org.uk/
|
| BIOPOP |
http://www.landeco.uni-oldenburg.de/Projects/biopop/main.htm
|
| FloraWeb |
https://www.floraweb.de/
|
| USDA GRIN |
https://www.ars-grin.gov/
|
| BiolFlor |
https://wiki.ufz.de/biolflor/index.jsp
|
| LEDA |
https://uol.de/en/landeco/research/leda
|
| USDA PLANTS |
https://plants.usda.gov/home
|
| BROT |
https://www.uv.es/jgpausas/brot.htm
|
| AusTraits |
https://austraits.org/
|
| Community Databases in Table 2 and Supplementary Table S3
|
|
| Phenomics |
GnpIS |
https://urgi.versailles.inra.fr/gnpis
|
| PGP Repository |
https://edal-pgp.ipk-gatersleben.de/
|
| Cartograplant |
https://cartograplant.org/
|
| AgData commons Plants & Crops |
https://data.nal.usda.gov/ag-data-commons-hierarchy/plants-crops
|
| PathoPlant |
http://www.pathoplant.de/
|
| PncStress |
http://bis.zju.edu.cn/pncstress/
|
| Indian Crop Phenome DB |
https://ibdc.rcb.res.in/icpd/
|
| Gene Expression |
Ozone Stress Responsive Gene Database |
https://www.osrgd.com
|
| EBI-Plant Expression Atlas |
https://www.ebi.ac.uk/gxa/plant/experiments
|
| CoNeKT |
https://conekt.sbs.ntu.edu.sg/
|
| Protein, peptides and proteomes |
Expath |
http://expath.itps.ncku.edu.tw/
|
| Proteome Xchange |
https://wwwz.proteomexchange.org
|
| Plant Proteome Database |
http://ppdb.tc.cornell.edu/
|
| PlantMWpIDB |
https://plantmwpidb.com/
|
| Heat Shock Proteins database |
http://hsfdb.bio2db.com/
|
| WallProtDB |
https://www.polebio.lrsv.ups-tlse.fr/WallProtDB/
|
| Aramemnon |
http://aramemnon.botanik.uni-koeln.de/
|
| PhosPhAt |
https://phosphat.uni-hohenheim.de/db.html
|
| Database of Phospho-sites in Plants |
http://dbppt.biocuckoo.org/browse.php
|
| Plant Protein Phosphorylation Database |
https://www.p3db.org/home
|
| qPTMplants |
http://qptmplants.omicsbio.info/
|
| Plant PTM viewer |
https://www.psb.ugent.be/webtools/ptm-viewer/
|
| PlaPPISite |
http://zzdlab.com/plappisite/index.ph
|
|
M. truncatula Small Secreted Peptide Database |
https://mtsspdb.zhaolab.org/database
|
| PlantPepDB |
http://14.139.61.8/PlantPepDB/index.php
|
| Arabidopsis PeptideAtlas |
http://www.peptideatlas.org/builds/arabidopsis/
|
| Indian Structural Data Archive |
https://isda.rcb.ac.in/
|
| Metabolites, biochemical and small chemical entities |
Antimicrobial plant peptides (PhytAMP) |
http://phytamp.pfba-lab-tun.org/main.php
|
| PubChem |
https://pubchem.ncbi.nlm.nih.gov
|
| ChEBI |
https://www.ebi.ac.uk/chebi
|
| Metabolomics Workbench |
https://www.metabolomicsworkbench.org
|
| Secondary Knowledgebase |
MetaboLights |
https://www.ebi.ac.uk/metabolights/index
|
| PoDP |
https://pairedomicsdata.bioinformatics.nl/
|
| Plant Reactome pathway knowledgebase |
https://plantreactome.gramene.org
|
| MetaCyc |
https://metacyc.org
|
| PMN |
https://plantcyc.org/data
|
| KEGG pathways |
https://www.genome.jp/kegg/pathway.html
|
| PlantPathMarks (PPMdb) |
http://ppmdb.easyomics.org/
|
| The Bio-Analytic Resource |
https://bar.utoronto.ca
|
| The protein–protein interaction database for Maize |
https://mai.fudan.edu.cn/ppim/
|
