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. 2023 Nov 16;67(12):e00860-23. doi: 10.1128/aac.00860-23

TABLE 1.

Summary features of top 10 Canadian blaKPC-encoding plasmid clusters among PLSDB

Primary cluster ID No. Canadian plasmids Median size (kb) Predicted mobilitya,b Replicon typea,b Relaxase typea,b MPF typea,b No. genera Core genes (%)d blaKPC allelea blaKPC frequency Tn4401 varianta Mean no. ARGs per plasmidc Plasmid taxonomic unit (PTU)e
AA002 62 75 Conjugative IncL/M MOBP MPF_I 12 0.09 blaKPC-3 0.34 Tn4401b 5.1 L/M
AA007 31 57.3 Conjugative IncN MOBF MPF_T 15 0.06 blaKPC-3 0.38 Tn4401b 6.1 N1
AA013 10 43.6 Mobilizable Rep_cluster_1367 MOBC f 8 0.18 blaKPC-2 0.86 Tn4401b 2.5 E8
AA014 13 55.6 Conjugative IncN MOBF MPF_T 4 0.28 blaKPC-3 0.71 Tn4401b 1.4 N2/3
AA017 7 47 Conjugative IncN MOBF MPF_T 5 0.14 blaKPC-2 0.18 Tn4401b 5 N2/3
AA029 9 113.6 Conjugative IncFIB, IncFII, rep_cluster_2183 MOBF, MOBF MPF_F 4 0.04 blaKPC-2 0.86 Tn4401a 3.6 FK
AA042 21 16.5 Mobilizable ColRNAI_rep_cluster_1857 MOBC 7 0.03 blaKPC-3 1 Tn4401b 1.7 Could not be assigned
AA085 185.7 Conjugative IncFIB, IncFII, rep_cluster_2183 MOBF, MOBF MPF_F 1 0.06 blaKPC-2 0.12 Tn4401a 5.9 FK
AA109 7 97.9 Non-mobilizable Rep_cluster_2268 [novel repE(pEh60-7)] MPF_F 1 0.2 blaKPC-3 0.78 Tn4401b 1 Could not be assigned
AA124 10 48.8 Conjugative IncX5 MOBP MPF_T 9 0.13 blaKPC-3 0.4 Tn4401b 1.6 New (putative) PTU
a

Values indicate the most common genotype in the cluster and may not apply to all plasmids in the cluster.

b

Values obtained from MOB-suite (24, 26). Mobility is assigned based on the presence of relaxase (mobilizable) and/or MPF proteins (conjugative) or absence of both (non-mobilizable).

c

ARGs = antimicrobial resistance genes.

d

Core genes represent the number of genes present in >95% of plasmids in the cluster, divided by the total number of non-redundant genes in the cluster.

e

PTU values obtained from COPLA (27) .

f

"-" indicates no relaxase or MPF protein detected.