Table 1.

Performance of DL-PPI on three datasets in relation to comparative methods

Dataset	Partition scheme	Method
		DNN-PPI	TAGPPI	PIPR	GNN-PPI	DL-PPI
SHS27k	Random	72.06	85.46	84.28	87.35	89.12
	BFS	50.26	49.68	47.39	68.67	72.95
	DFS	59.43	63.57	54.25	71.82	78.07
SHS148k	Random	87.26	89.21	91.04	90.07	92.49
	BFS	56.44	55.9	59.87	67.42	68.87
	DFS	59.18	67.35	62.66	84.05	85.45
STRING	Random	82.04	89.03	92.76	93.61	94.85
	BFS	57.89	58.93	57.15	76.85	77.53
	DFS	59.52	68.04	65.48	90.38	92.76

The numbers in bold indicate the best performance

The results are reported as the Micro-F1 scores