Table 1. Mutation spectra inferred from single nucleotide polymorphisms in human and mouse populations.a.
No | N X N | N Y N | X | Y | Total number of SNPs | Fraction | N′X′N′ | N′Y′N′ | X′ | Y′ | Total number of SNPs | Fraction | Difference (%) |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Human SNPs | |||||||||||||
1 | AGC | ATC | G | T | 312,720 | 0.37 | GAT | GCT | A | C | 310,244 | 0.36 | 0.79 |
2 | CAA | CTA | A | T | 227,826 | 0.27 | TAG | TTG | A | T | 229,630 | 0.27 | 0.79 |
3 | ACT | ATT | C | T | 2367,625 | 2.77 | AAT | AGT | A | G | 2375,298 | 2.78 | 0.32 |
4 | AAA | AGA | A | G | 1729,945 | 2.02 | TCT | TTT | C | T | 1734,336 | 2.03 | 0.25 |
5 | TAT | TTT | A | T | 544,308 | 0.64 | AAA | ATA | A | T | 543,030 | 0.64 | 0.23 |
6 | GAG | GTG | A | T | 287,742 | 0.34 | CAC | CTC | A | T | 288,408 | 0.34 | 0.23 |
7 | GCG | GTG | C | T | 2008,008 | 2.35 | CAC | CGC | A | G | 2008,195 | 2.35 | 0.01 |
8 | TAA | TGA | A | G | 1448,254 | 1.69 | TCA | TTA | C | T | 1448,196 | 1.69 | 0.00 |
Mouse SNPs | |||||||||||||
1 | CGA | CTA | G | T | 38,698 | 0.26 | TAG | TCG | A | C | 38,235 | 0.25 | 1.20 |
2 | AAG | ATG | A | T | 88,927 | 0.59 | CAT | CTT | A | T | 89,884 | 0.59 | 1.06 |
3 | GAG | GCG | A | C | 50,929 | 0.34 | CGC | CTC | G | T | 50,724 | 0.33 | 0.40 |
4 | CAG | CCG | A | C | 56,636 | 0.37 | CGG | CTG | G | T | 56,410 | 0.37 | 0.40 |
5 | GAT | GTT | A | T | 63,675 | 0.42 | AAC | ATC | A | T | 63,432 | 0.42 | 0.38 |
6 | ACT | ATT | C | T | 384,248 | 2.53 | AAT | AGT | A | G | 384,516 | 2.54 | 0.07 |
7 | TAT | TTT | A | T | 103,335 | 0.68 | AAA | ATA | A | T | 103,323 | 0.68 | 0.01 |
8 | AAG | AGG | A | G | 299,963 | 1.98 | CCT | CTT | C | T | 299,979 | 1.98 | 0.01 |
Notes.
Data are shown only for eight reverse complementary pairs of triplets out of total 48 pairs. For the complete data set see Table S1.