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. 2023 Dec 14;11:e16671. doi: 10.7717/peerj.16671

Table 1. Mutation spectra inferred from single nucleotide polymorphisms in human and mouse populations.a.

No N X N N Y N X Y Total number of SNPs Fraction N′X′N′ N′Y′N′ X′ Y′ Total number of SNPs Fraction Difference (%)
Human SNPs
1 AGC ATC G T 312,720 0.37 GAT GCT A C 310,244 0.36 0.79
2 CAA CTA A T 227,826 0.27 TAG TTG A T 229,630 0.27 0.79
3 ACT ATT C T 2367,625 2.77 AAT AGT A G 2375,298 2.78 0.32
4 AAA AGA A G 1729,945 2.02 TCT TTT C T 1734,336 2.03 0.25
5 TAT TTT A T 544,308 0.64 AAA ATA A T 543,030 0.64 0.23
6 GAG GTG A T 287,742 0.34 CAC CTC A T 288,408 0.34 0.23
7 GCG GTG C T 2008,008 2.35 CAC CGC A G 2008,195 2.35 0.01
8 TAA TGA A G 1448,254 1.69 TCA TTA C T 1448,196 1.69 0.00
Mouse SNPs
1 CGA CTA G T 38,698 0.26 TAG TCG A C 38,235 0.25 1.20
2 AAG ATG A T 88,927 0.59 CAT CTT A T 89,884 0.59 1.06
3 GAG GCG A C 50,929 0.34 CGC CTC G T 50,724 0.33 0.40
4 CAG CCG A C 56,636 0.37 CGG CTG G T 56,410 0.37 0.40
5 GAT GTT A T 63,675 0.42 AAC ATC A T 63,432 0.42 0.38
6 ACT ATT C T 384,248 2.53 AAT AGT A G 384,516 2.54 0.07
7 TAT TTT A T 103,335 0.68 AAA ATA A T 103,323 0.68 0.01
8 AAG AGG A G 299,963 1.98 CCT CTT C T 299,979 1.98 0.01

Notes.

a

Data are shown only for eight reverse complementary pairs of triplets out of total 48 pairs. For the complete data set see Table S1.