TABLE 1.
Gene name | Nuclear receptor | Ligand | Function in cholesterol metabolism and NAFLD | References |
---|---|---|---|---|
NR0B1 | DAX1 | Orphan | DAX-1 inhibits the transcriptional activity of LRH-1 and LXRα, and inhibits gluconeogenesis by negatively regulating HNF4A | 55–57 |
NR0B2 | SHP | Orphan | The expression of SHP inhibits CYP7A1, and downregulation of SHP accelerates the transformation of cholesterol to bile acids by activating CPY7A1 | 58,59 |
NR1A1 | TRα | Thyroid hormones | Downregulation of TRα alleviates diet-induced hepatic steatosis | 60,61 |
NR1A2 | TRβ | Thyroid hormones | Loss of TRβ shows excessive lipid accumulation in both human and mouse livers | 62–64 |
NR1B1 | RARα | Retinoic acids | Loss of RARα-induced hepatic steatosis and decreased macrophage cholesterol effection in HFD-fed mice. Upregulation of RARα could reduce hepatic lipid accumulation by decreasing CD36 expression | 65–67 |
NR1B2 | RARβ | Retinoic acids | Upregulation of RARβ can alleviate hepatic lipid accumulation in hepatocytes | 68,69 |
NR1B3 | RARγ | Retinoic acids | Upregulation of RARγ activates ABCA1-mediated cholesterol efflux | 70 |
NR1C1 | PPARα | Fatty acids | Metabolomics has revealed that PPARα is an important regulator of bile acids by interacting with SREBP2, and that PPAR-α/γ agonist Saroglitazar significantly improves insulin resistance and dyslipidemia in NAFLD | 71–73 |
NR1C2 | PPARβ | Fatty acids | PPARβ/δ inhibits CYP7a1 expression by upregulating FGF21 | 74 |
NR1C3 | PPARγ | Fatty acids | PARγ inhibitor GW9662 can reduce the development of NAFLD by inhibiting TLR4, but PPARγ can promote cholesterol effluence by inducing the expression of ABCA1 in gallbladder epithelium | 75,76 |
NR1D1 | REV-ERBα | Heme | REV-ERB coordinates the regulation of most genes encoding important enzymes in the cholesterol biosynthesis pathway, and downregulation of Rev-ERbα promotes bile acid metabolism through upregulation of CYP7A1 | 77–79 |
NR1D2 | REV-ERBβ | Heme | Activation of REV-ERBα/β reduces hepatic triglyceride storage and inhibits cholesterol synthesis, and can increase promoter activity of CYP7A1 | 80,81 |
NR1F1 | RORα | Sterols | Overexpression of RORα reduces diet-induced hepatic lipid accumulation, and its inverse agonist SR1001 regulates intestinal excretion of cholesterol by upregulating ABCG5/G8 | 82,83 |
NR1F3 | RORγ | Sterols | Knockout of RORγ may reduce bile acid synthesis by decreasing levels of Cyp8b1, Cyp7b1, and Cyp27a1 | 84 |
NR1H4 | FXRα | Bile acids | FXRα can promote CYP7A1 expression through FGF19 and SHP/LRH-1 pathway, competitively inhibit LXRα to promote CETP transcription and reduce liver cholesterol uptake and accumulation | 85–87 |
NR1H3 | LXRα | Oxysterols | LXRα activates ABCG5/8 to promote the excretion of cholesterol in bile. LXRα can promote cholesterol effection in gallbladder epithelium by inducing the expression of ABCA1. LXRα deficiency leads to downregulation of CYP7A1 level, leading to liver cholesterol accumulation | 76,88,89 |
NR1H2 | LXRβ | Oxysterols | LXRβ agonists induce the expression of cholesterol pump ABCA1 in bile duct cells and promote the output of cholesterol from the basolateral membrane of bile duct cells | 90 |
NR1I1 | VDR | 1α,25‐dihydroxyvitamin D3 | VDR is significantly highly expressed in NAFLD, and its deficiency leads to reduced fat accumulation when aging and adult mice are fed a high-fat diet | 91,92 |
NR1I2 | PXR | Endobiotics and xenobiotics | PXR aggravated hepatic steatosis caused by a high-fat diet, and PXR KO mice had significantly reduced levels of liver triglycerides, hepatic steatosis, serum total bile acids, and liver gene expression of enzymes involved in the bile acid synthesis pathway | 93,94 |
NR1I3 | CAR | Xenobiotics | CAR is able to confer hepatoprotection from bile acids by increasing their sulfation and excretion | 95,96 |
NR2A1 | HNF4α | Fatty acids | Loss of HNF4α enhances hepatic cholesterol accumulation by inhibiting CYP7A1/CYP8B1, FXR, and ABCAS1, and loss of HNF4α in mice shows hepatic steatosis and reduced plasma cholesterol levels | 97–99 |
NR2B1 | RXRα | 9‐Cis retinoic acid | RXRα serves as a heterodimerization partner for PPARα, PXR, LXR, and FXR to participate in the regulation of cholesterol metabolism | 100–104 |
NR2C2 | TR4 | Orphan | TR4 knockout reduces liver lipid accumulation and can reduce apoE levels | 105,106 |
NR2E1 | TLX | Orphan | Mice with NR2E1 knocked out display a significant hepatic steatosis phenotype | 107 |
NR2F1 | COUP-TFα | Orphan | COUP-TFα exerts a transcriptional repression effect by binding to the promoter region of apoCIII | 108 |
NR2F2 | COUP-TFβ | Orphan | HNF4 and coup-TF-β synergistically activate the transcription of the CYP7A1 promoter | 109,110 |
NR2F6 | EAR2 | Orphan | EAR2 inhibits the transcription of the genes encoding apoB, apoCIII, and apoAII | 111 |
NR3A1 | ERα | Estrogens | ERα upregulates the expression of intestinal Npc1l1, Abcg5 and Abcg8, inhibits the transcriptional activity of LXRα in liver, and interacts with FXR in an estradiol-dependent manner to inhibit its function in vitro | 112–114 |
NR3A2 | ERβ | Estrogens | Absence of Erβ alleviates the disruption of bile acid and cholesterol metabolism induced by perfluorooctane sulfonate | 115 |
NR3B1 | ERRα | Orphan | VLDL-TG secretion is reduced in ERRα KO mice, leading to hepatic steatosis | 116 |
NR3B3 | ERRγ | Orphan | Overexpression of ERRγ upregulates the expression of CYP7A1 both in vitro and in vivo | 117 |
NR3C1 | GR | Glucocorticoids | GR interacts with FXR to reduce FXR transcriptional activity and promote hepatic cholestasis in mice by recruiting CtBP coblocking complex, and GR regulator CORT118335 can reverse hepatic cholesterol accumulation | 118,119 |
NR3C2 | MR | Mineralocorticoids and glucocorticoids | Specific blockade of MR exhibits hepatic antisteatotic effects | 120 |
NR3C4 | AR | Androgens | AR reduces cholesterol synthesis by mediating phosphorylation of HMGCR and promotes cholesterol synthesis and accumulation by activating sterol-regulatory element-binding protein isoform 2 | 121,122 |
NR4A1 | Nur77 | Orphan | Nur77 regulates liver lipid metabolism by inhibiting SREBP1c activity, and the levels of TCHO, LDLR, HMGCR, and Nur77 in HepG2 cells are negatively correlated | 123,124 |
NR5A2 | LRH‐1 | Phospholipids | LRH-1 regulates hepatic cholesterol excretion through CYP7A1 and CYP8B1 | 125 |
Abbreviations: ABCA1, ATP-binding cassette transporter A1; CYP7A1, cytochrome P450; FXR, farnesoid X receptor; HNF4α, hepatocyte nuclear factor 4 alpha; KO, knockout; LDLR, LDL receptor; LXR, liver X receptor; PPAR, peroxisome proliferator-activated receptor; SHP, small heterodimer partner.