TABLE 4.
Metadata and sequencing statistics for selected VEEV complex RNA positive samples c
| ID | Collection year | Location | Host species | Percent genome coverage 20× | Percent Nt identity with genome reference a , b | Percent identity with strain 3880 c | C values |
|---|---|---|---|---|---|---|---|
| 700677 | 2015 | Darien | Culex (Mel.) vomerifer | 100 | 89.8 | 92.1 | 27 |
| 700680 | 2015 | Darien | Culex (Mel.) vomerifer | 100 | 89.8 | 92.2 | 31 |
| 700732 | 2015 | Darien | Culex (Mel.) vomerifer | 100 | 90 | 92.3 | 26 |
| 258379 | 2015 | Darien | Human | 99.9 | 89.6 | 92 | 31 |
| 258398 | 2015 | Darien | Human | 70 | 88.7 | 90.7 | 27 |
| 258401 | 2015 | Darien | Human | 90.6 | 87.7 | 90 | 29 |
| 278716 | 2022 | Darien | Human | 45.98 | 88.1 | 90 | 20 |
a
Genbank accession no. NC_001449.1.
b
Nt = Nucleotide.
c
Panamanian VEEV ID subtype prototype strain 3880, GenBank accession no. L00930.1.