TABLE 3.

Complete genomic data for 10 C. tetani strains isolated in Japan and putative replicon copy numbers

Clade	C. tetani strain name	Ratio of tetanus toxin productiona	Replicon type	Complete sequence length (bp)	No. of CDS	Average read depth (Illumina short read)	Relative copy numbers to chromosome
Clade 1-1	KHSU-144316-041	0.1	Chromosome	2,863,790	2,780	349	1
			Plasmid	68,022	89	1,089	3
			Phage	138,965	179	943	3
	NIID-072000-002	0.17	Chromosome	2,761,480	2,632	577	1
			Plasmid	58,138	76	1,251	2
	KHSU-234311-028	0.26	Chromosome	2,814,725	2,687	297	1
			Plasmid	58,128	76	508	2
			Phage	45,581	72	928	3
	KHSU-144312-032	0.66	Chromosome	2,849,129	2,738	243	1
			Plasmid	61,222	78	622	3
Clade 1-2	KHSU-154306-013	0.22	Chromosome	2,801,574	2,609	2,401	1
			Plasmid	94,849	118	3,189	1
	NIID-071400-001	0.33	Chromosome	2,810,882	2,673	301	1
			Plasmid	112,887	134	1,455	5
	KHSU-134307-016	0.9	Chromosome	2,771,884	2,623	329	1
			Plasmid	67,592	83	1,205	4
Clade 1-3	KHSU-154307-017	0.83	Chromosome	2,751,438	2,607	1,521	1
			Plasmid	66,982	80	4,307	3
	KHSU-144313-037	1.38	Chromosome	2,734,951	2,545	322	1
			Plasmid	66,968	80	407	1
			Phage	51,784	81	257	1
	KHSU-254310-026	5.99	Chromosome	2,864,328	2,722	285	1
			Plasmid	66,005	81	1,126	4

^a The ratio is also shown in Fig. 5.