Table 1.
Q209P/L–HLA type pairs binding prediction per tool. Weak binder (WB) and strong binder (SB).
| Alelle | NetMHC | NetMHCpan | NetMHCcons | NetMHCpanstab | MHCSeqNet | MHCflurry | MixMHCpred |
|---|---|---|---|---|---|---|---|
| HLA-A*01:01 | MVDVGGLRS (WB) | MVDVGGLRS (WB) | MVDVGGLRS MVDVGGPRS |
MVDVGGLRS | |||
| HLA-A*03:01 | RMVDVGGLR (WB) | RMVDVGGPR (WB) RMVDVGGLR (WB) |
RMVDVGGLR (WB) | RMVDVGGPR (WB) RMVDVGGLR (WB) |
RMVDVGGPR RMVDVGGLR |
RMVDVGGPR RMVDVGGLR |
|
| HLA-A*26:01 | DVGGPRSER (WB) | DVGGLRSER | |||||
| HLA-B*07:02 | GPRSERRKW (WB) | GPRSERRKW (WB) | GPRSERRKW | GPRSERRKW | |||
| HLA-B*08:01 | |||||||
| HLA-B*27:05 |
FRMVDVGGL (SB) LRSERRKWI (SB) |
FRMVDVGGL (SB) | FRMVDVGGL (SB) | FRMVDVGGL (SB) |
FRMVDVGGP FRMVDVGGL LRSERRKWI |
FRMVDVGGL LRSERRKWI |
|
| HLA-B*39:01 | FRMVDVGGL (SB) | FRMVDVGGL (SB) | FRMVDVGGL (SB) | FRMVDVGGL (SB) | FRMVDVGGP FRMVDVGGL |
FRMVDVGGL | FRMVDVGGL |
| HLA-B*58:01 | GLRSERRKW | GLRSERRKW |