Table 4.
Performance comparison of the quadruplex PCR amplicon sequencing on Bartonella quintana- and B. triborcorum-DNA derived from different sample types.
| Culture-derived Bartonella quintana DNA | Lice-derived Bartonella quintana DNA | Culture-derived Bartonella tribocorum DNA | Rat spleen-derived Bartonella tribocorum DNA | |
|---|---|---|---|---|
| gltA | Yes | Yes | Yes | Yes |
| groEL | x | x | Yes | Yes |
| rpoB | Yes | Yes | Yes | x |
| ssrA | Yes | Yes | x | x |
Three replicates of each sample were tested. Yes, identical sequences of the target for the Bartonella species were obtained for all three replicates. x, sequences of the target for the Bartonella species were obtained in ≤ 2 replicates.