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. 2023 Dec 21;10:926. doi: 10.1038/s41597-023-02842-4

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — Cladogram of 800 validated MarFERReT entries and summary of reference metadata. (a) Cladogram of hierarchical taxonomic ranks of marine eukaryotes within the NCBI Taxonomy framework²⁹³ using the NCBI CommonTree tool. Each tip is a unique taxon included in MarFERReT, defined by its NCBI taxID identifier. Branches are colored by taxonomic lineage with size of the closed circle at each tip proportional to the number of validated entries in each taxon. Concentric rings describe metadata and statistics for each taxon. From innermost ring outward: year of publication or data release for sequence data (average year of release for multiple entries), number of clustered sequences in taxon, raw input format of sequence data: transcriptome, transcriptome shotgun assembly; genome, genome-derived gene models; SAG, single-cell amplified genome; SAT, single-cell amplified transcriptome; or a combination of types (mixed), and source of data: NCBI²⁹³, METdb⁷, JGI PhycoCosm³⁰⁰, or MMETSP³. (b) Number of clustered sequences in MarFERReT build by year of data release, and (c) Histogram showing distribution of clustered sequence count for 453 taxa in the final build.