Table 3.
Comparison of Ct values between a qPCR assay with the LipL32(1) primers and one with the LipL32(2) primers
Group | DNA concentration (ng/μL) | LipL32(1) Ct value | LipL32(2) Ct value |
---|---|---|---|
Positive control | |||
L. borgpetersenii serovar Ballum strain Mus 127 | 26.4 | 15.33 | 32.08 |
L. borgpetersenii serovar Hardjobovis strain 117123 | 20.6 | 17.41 | 33.36 |
L. borgpetersenii serovar Javanica* | 8.2 | 16.22 | 36.14 |
L. borgpetersenii serovar Javanica strain Veldrat Bataviae 46 | 41.0 | 14.35 | 33.96 |
L. borgpetersenii serovar Tarassovi strain Perepelitsin | 16.1 | 20.54 | 36.39 |
L. interrogans serovar Australis* | 9.9–11.9 | 15.43–15.58 | 33.78–34.38 |
L. interrogans serovar Australis strain Ballico | 11.8 | 29.67 | N |
L. interrogans serovar Autumnalis strain Akiyami A | 32.6 | 23.56 | N |
L. interrogans serovar Bataviae* | 5.3–20.1 | 13.91–16.02 | 34.11–35.91 |
L. interrogans serovar Bataviae strain Swart | 15.8 | 17.97 | 34.29 |
L. interrogans serovar Canicola strain Hond Utrecht IV | 12.7 | 14.99 | 34.08 |
L. interrogans serovar Copenhageni strain M20 | 2.5 | 17.95 | 34.44 |
L. interrogans serovar Djasiman strain Djasiman | 11.5 | 16.20 | 35.43 |
L. interrogans serovar Hebdomadis strain Hebdomadis | 28.4 | 16.77 | 33.91 |
L. interrogans serovar Icterohaemorrhagiae strain RGA | 16.8 | 14.3 | 32.81 |
L. interrogans serovar Lai strain Lai | 12.8 | 19.22 | 36.19 |
L. interrogans serovar Pomona strain Pomona | 7.2 | 18.05 | 35.44 |
L. interrogans serovar Pyrogenes strain Salinem | 43.3 | 21.40 | N |
L. kirschneri serovar Cynopteri strain 3522C | 29.7 | 14.44 | 33.60 |
L. kirschneri serovar Grippotyphosa strain Moskva V | 42.3 | 13.04 | 31.79 |
L. kmetyi serovar Malaysia strain Bejo-ISO9 | 36.1 | 18.78 | 33.34 |
L. weilii serovar Celledoni strain Celledoni | 13.0 | 24.15 | 40.52 |
Non-target negative control | |||
Bacillus spp. | 9.9 | N | N |
Escherichia coli | 16.0 | N | N |
L. biflexa serovar Patoc strain Patoc I | 42.9 | N | N |
L. selangorensis ** | 8.7-14.3 | N | N |
L. wolffii** | 6.7-19.3 | N | N |
Pseudomonas aeruginosa | 84.9 | N | N |
Salmonella spp. | 41.1 | N | N |
Staphylococcus aureus | 14.4 | N | N |
Streptococcus spp. | 4.2 | N | N |
No-target negative control | |||
RNase-free water | 0 | N | N |
* - dog isolates;
** - environmental isolates; N - negative