TABLE 3.
Eubacterial species whose genomes contain Icc homologs
| Organism | Icc homologa
|
No. of aa | E valueb | Source/accession no. (reference) | |
|---|---|---|---|---|---|
| % Identical | % Similar | ||||
| Actinobacillus actinomycetemcomitansc | 64.2 | 78.2 | 271 | 1e-106 | QUAGCT (37) |
| Escherichia coli | 53.3 | 71.3 | 231 | 4e-77 | GenBank/D16557 (16) |
| Pseudomonas aeruginosac | 27.7 | 46 | 260 | 1e-34 | PAGP (32) |
a
Gapped TBLASTN (3) searches of the completely sequenced genomes of the following bacterial species found no sequences with significant identity to Icc: Borrelia burgdorferi (36), Chlamydia trachomatis (12), Helicobacter pylori (36), Neisseria meningitidis (34, 36), Synechocystis strain PCC 6803 (21), Treponema pallidum (36), Bacillus subtilis (8), Mycoplasma genitalium (36), and Streptococcus pyogenes (37).
b
Likelihood that an identified sequence match could have occurred by change.
c
Sequencing and/or analysis of the genome is incomplete.