TABLE 2.
Homologies of proteins in pYUB563 to selected sequences from other organismsa
Protein in pYUB563 | Homologous protein | % Iden- tityc | % Simi- larityb,c | Accession no. or referenced |
---|---|---|---|---|
ORF1 | Streptomyces glaucescens StrV | 27 | 38 | 1361425 |
ORF2 | S. glaucescens StrW | 31 | 46 | 1361426 |
FxbB | Streptomyces roseosporus daptomycin biosynthesis protein subunit | 31 | 32 | AF021262 |
Streptomyces pristinaespiralis SnbC | 38 | 50 | 9 | |
FxbC | S. pristinaespiralis SnbED | 36 | 47 | 1906378 |
FxuD | Corynebacterium diphtheriae ORF1 | 34 | 49 | 37 |
Bacillus subtilis FhuD | 30 | 51 | 2226253 | |
M. tuberculosis MTCY6A4.09C | 36 | 51 | 1850110 | |
Synechocystis sp. strain FepB | 31 | 47 | 1651665 | |
ORF3 | M. tuberculosis MTV007.05c ABC transporter ATP-binding protein | 86 | 94 | 2791392 |
M. leprae ABC2 | 82 | 89 | 2145963 | |
ORF4 | M. tuberculosis MTV007.04c | 56 | 61 | 2791391 |
M. leprae B1496-F2-59 | 51 | 58 | 2145664 | |
ORF5 | M. tuberculosis MTV007.03c | 44 | 52 | 2791390 |
M. leprae B1496-F2-61 | 47 | 56 | 2145665 |
Homologies were calculated by using the gapped BLAST program (2) of the National Center for Biotechnology Information (www.ncbi.nlm.nih.gov).
Includes conservative substitutions.
These homologies are over the entire length of these genes.
GenBank accession numbers or literature references.