TABLE 2.
Comparison of overlapping coding sequences from fosmid 101G10 and fosmid 60A5
| Gene namea | Functional category | % Identity
|
|
|---|---|---|---|
| Nucleotide | Amino acid | ||
| Hypothetical 01 | Unknown | 81.4 | 76.6 |
| 23S | Translation | 99.16 | |
| 16S | Translation | 99.3 | |
| GSAT | Heme biosynthesis | 83.2 | 83.8 |
| Hypothetical 02 | Unknown | 83.4 | 81.4 |
| ORF 01 | Unknown | 83.3 | 85.7 |
| ORF 02 | Unknown | 89.9 | 95.2 |
| ORF 03 | Unknown | 87.9 | 86.7 |
| tRNATyr | Translation | 99.2 | |
| ORF 04 | Unknown | 87.8 | 88.1 |
| TIM | Glycolysis | 80.9 | 83.3 |
| TBP | Transcription | 83.4 | 86.3 |
| DNA polymerase | Replication/repair | 89.0 | 93.9 |
| dCMP deaminase | Pyrimidine synthesis | 85.7 | 89.8 |
| RNA helicase (ATP dependent) | Translation | 86.1 | 92.2 |
| PPI | Chaperone | 88.4 | 92.5 |
| Hypothetical 03 | Unknown | 91.5 | 92.4 |
| MenA | Menaquinone biosynthesis | 86 | 89.4 |
| ORF 05 | Unknown | 87.5 | 90.6 |
| Methylase | Restriction/modification | 86.4 | 87.5 |
a
Hypothetical, ORF with similarity to proteins of unknown function from the databases; ORF, open reading frame identified by similarity between both fosmids, including upstream promoter sequence; TIM, triosephosphate isomerase; PPI, peptidylprolyl cis,trans-isomerase.