Table 1. Number of passed nanopore reads and bases (Q-score >7), number of reads and bases mapping to the kākāpō reference genome, and relative amount [%] of mapped reads and bases per soil sample.
Sample | Run | # reads | # bases | # mapped reads | # mapped bases | % mapped reads | % mapped bases |
---|---|---|---|---|---|---|---|
Sample 3 | selective | 903,250 | 313,408,229 | 137 | 67,480 | 0.015 | 0.022 |
non-selective | 3,942,038 | 6,134,919,092 | 2,739 | 7,983,165 | 0.069 | 0.130 | |
Sample 11 | selective | 4,914,329 | 2,062,605,132 | 769 | 435,963 | 0.016 | 0.021 |
Sample 35 | selective | 2,151,935 | 802,633,273 | 563 | 324,114 | 0.026 | 0.040 |
non-selective | 4,133,117 | 7,708,401,775 | 3,854 | 10,720,441 | 0.093 | 0.139 |