REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse monoclonal to CD31 (clone WM59), APC | ThermoFisher | Cat. #17-0319-42; RRID: AB_10852842 |
Mouse monoclonal to CD31 (clone JC/70A) | ThermoFisher | Cat. #MA5-13188; RRID: AB_10982120 |
Mouse monoclonal to NFATC1 (clone 7A6) | ThermoFisher | Cat. #MA3-024; RRID: AB_2236037 |
Rabbit monoclonal to VIMENTIN (clone SP20) | ThermoFisher | Cat. #MA5-16409; RRID: AB_2537928 |
Mouse monoclonal to CD34 (clone 561), PE-Cy7 | BioLegend | Cat. #343616; RRID: AB_2629726 |
Mouse monoclonal to CD56 (clone 5.1H11), APC | BioLegend | Cat. #362504; RRID: AB_2563913 |
Mouse monoclonal to CD13 (clone WM15), PE | BioLegend | Cat. #301704; RRID: AB_314180 |
Rabbit monoclonal to NKX2.5 (clone E1Y8H) | Cell Signaling Technology | Cat. #8792; RRID: AB_2797667 |
Rabbit polyclonal to VE-CADHERIN | Cell Signaling Technology | Cat. #2158; RRID: AB_2077970 |
Mouse monoclonal to PERIOSTIN (clone F-10) | Santa Cruz Biotechnology | Cat. #sc-398631; RRID: AB_2934053 |
Rabbit polyclonal to SOX9 | MilliporeSigma | Cat. #AB5535; RRID: AB_2239761 |
Mouse monoclonal to αSMA (Clone 1A4) | Abcam | Cat. #ab7817; RRID: AB_262054 |
Mouse monoclonal to PDGFRβ (clone 28D4), BV786 | BD Biosciences | Cat. #743038; RRID: AB_2741234 |
Goat anti-Mouse IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | ThermoFisher | Cat. #A-1100; RRID: AB_2534069 |
Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | ThermoFisher | Cat. #A-11008; RRID: AB_143165 |
Goat anti-Mouse IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 | ThermoFisher | Cat. #A-11004; RRID: AB_2534072 |
Goat anti-Rabbit IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 | ThermoFisher | Cat. #A-11011; RRID: AB_143157 |
Chemicals, peptides, and recombinant proteins | ||
Recombinant Human BMP10 | R&D | Cat. #2926-BP |
Recombinant Human bFGF | R&D | Cat. #233-FB |
Recombinant Human VEGF-165 | R&D | Cat. #293-VE |
Recombinant Human/Mouse/Rat BMP2 | R&D | Cat. #355-BM |
Recombinant Human TGF-beta 2 | R&D | Cat. #302-B2 |
Human Apo-Transferrin | R&D | Cat. #3188-AT |
Penicillin/streptomycin | ThermoFisher | Cat. #15140122 |
GlutaMAX | ThermoFisher | Cat. #35050061 |
Bovine Serum Albumin Fraction V (BSA) | ThermoFisher | Cat. #15260037 |
Ascorbic Acid | MilliporeSigma | Cat. #A4544 |
2-Mercaptoethanol | MilliporeSigma | Cat. #M3148 |
DAPI | MilliporeSigma | Cat. #9564 |
Fetal Bovine Serum (FBS) | MilliporeSigma | Cat. #F4135 |
Fibronectin Human Plasma | MilliporeSigma | Cat. #F0895 |
Triton X-100 | MilliporeSigma | Cat. #93418 |
Sodium Azide | MilliporeSigma | Cat. #S2002 |
Tween-20 | MilliporeSigma | Cat. #P1379 |
DNase I | MilliporeSigma | Cat. # 260913 |
DMSO | MilliporeSigma | Cat. #D2650 |
4% Paraformaldehyde | ThermoFisher | Cat. # J19943K2 |
CHIR 99021 | Tocris | Cat. #4423 |
Collagenase Type II | Worthington | Cat. #LS004176 |
Thiazovivin | Selleckchem | Cat. #S1459 |
Matrigel, Growth Factor Reduced | Corning | Cat. #354230 |
HEPES | Research Products International | Cat. #H75050 |
Glycine | Bio-Rad | Cat. #1610718 |
Proteinase K | Qiagen | Cat. #19131 |
Accutase | Accutase | Cat. #AT104 |
Critical commercial assays | ||
Superscript IV VILO | ThermoFisher | Cat. #11756050 |
PowerTrack SYBR Green | ThermoFisher | Cat. #A46012 |
RNA 6000 Nano Kit | Agilent | Cat. # 5067-1511 |
CD31 MicroBead Kit | Miltenyi Biotec | Cat. #130-091-935 |
CD34 MicroBead Kit | Miltenyi Biotec | Cat. #130-046-702 |
Deposited data | ||
Raw & processed data from iPSC-derived populations | This study | GEO: GSE226476 |
15-week-old fetal human valve single-cell RNAseq data | Liu et al., 202353 | GEO: GSE228638 |
Experimental models: Cell lines | ||
WTC11 (ACTN2-eGFP tagged, monoallelic) | Coriell Institute | Cat. #AICS-0075-085 |
MSN02-452,53 | Gift from Dr. Dubois | N/A |
Oligonucleotides | ||
See Table S1 | This study | Table S1 |
Software and algorithms | ||
FCS Express 7 | De Novo Software | https://denovosoftware.com/ |
GraphPad Prism | GraphPad | https://www.graphpad.com/ |
R CRAN, Version 4.2.0 | https://cran.r-project.org/ | |
STAR v.2.7.10a54 | https://github.com/alexdobin/STAR | |
Picard v2.26.10 | http://broadinstitute.github.io/picard/ | |
HTSeq v2.0.255 | https://htseq.readthedocs.io/en/master/ | |
DESeq256 | https://bioconductor.org/packages/release/bioc/html/DESeq2.html | |
Enrichr58 | https://maayanlab.cloud/Enrichr/ | |
Seurat v467 | https://satijalab.org/seurat/ | |
FIJI | https://imagej.net/software/fiji/ | |
Other | ||
RPMI 1640 | ThermoFisher | Cat. #11875093 |
B27 Supplement | ThermoFisher | Cat. #17504044 |
B27 Supplement, Minus Insulinf | ThermoFisher | Cat. #A1895601 |
DMEM, high glucose | ThermoFisher | Cat. #11965092 |
PBS, no calcium, no magnesium | ThermoFisher | Cat. #14190144 |
6-well clear flat bottom TC-treated culture plates | Fisher Scientific | Cat. #FB012927 |
24-well clear flat bottom TC-treated culture plates | Fisher Scientific | Cat. #FB012929 |
40um cell strainer | Fisher Scientific | Cat. #22363547 |
Fibroblast Growth Medium, Kit | PromoCell | Cat. #C-23110 |
Endothelial Cell Growth Medium MV2, Kit | PromoCell | Cat. #C-22121 |
HBSS | Corning | Cat. #21022CV |
EasySep Buffer | StemCell Technologies | Cat. #20144 |
12-well chamber slide | Ibidi | Cat. #81201 |
Coverslips | Ibidi | Cat. #10811 |
VECTASHIELD PLUS Antifade Mounting Medium | Vector Laboratories | Cat. #H-1900 |
LS Column | Miltenyi Biotec | Cat. #130-042-401 |
Cell Counting Slides | Bio-Rad | Cat. #1450015 |
Trypan Blue | Bio-Rad | Cat. #1450021 |
Human Reference cDNA | Takara | Cat. #636693 |