Table 1.

Performance comparison of ECOLE with CNLearn on 28 samples from the 1000 Genomes Project

Tool	DEL Precision	DUP Precision	Overall Precision	DEL Recall	DUP Recall	Overall Recall	DEL F1 Score	DUP F1 Score	Overall F1 Score
CNLearn	0.084	0.221	0.152	0.002	0.010	0.006	0.004	0.019	0.012
ECOLE	0.834	0.679	0.757	0.541	0.500	0.520	0.656	0.675	0.617

Note that these 28 samples are not included in the training set of ECOLE and the predictions are obtained via personal communication with the authors.