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. 2023 Dec 13;5(1):102774. doi: 10.1016/j.xpro.2023.102774
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

E. coli DH5α NEB Cat#C2987H
E. coli GB06 Lab stock N/A
E. coli DB3.1 Lab stock N/A

Chemicals, peptides, and recombinant proteins

K2HPO4 Sigma-Aldrich P3786
KH2PO4 Merck 1.04873
MgSO4·7H2O Sigma-Aldrich 3138
NH4Cl Sigma-Aldrich A9434
CaCl2·2H2O Merck C7902
KCl Merck 1.04936
Tris base Sigma-Aldrich T1503
Acetic acid, glacial Merck 1.00063
Agar Fisher Scientific BD 214010
Sucrose Alfa Aesar 36508
Alt-R S.p. Cas9 Nuclease V3 IDT Cat#1081058
Platinum SuperFi II PCR master mix (2×) Thermo Fisher Scientific Cat#12368010
Platinum II Hot-Start PCR master mix (2×) Thermo Fisher Scientific Cat#14000013
Paromomycin TCI P2092
Nourseothricin Jena Bioscience AB-102XL
Blasticidin S Carl Roth CP14.2
Spectinomycin Merck S4014-5G
EvaGreen Plus Biotium 31077-T
GelGreen Biotium 41005
Betaine Merck 61962
NEBuilder HiFi assembly master mix NEB E2621L
BspQI NEB R0712L
BtsI-v2 NEB R0667L
SacI-HF NEB R3156L
EcoRI-HF NEB R3101L
NheI-HF NEB R3131S
Hutner’s trace elements Chlamydomonas Resource Center N/A
IGEPAL CA-630 Merck I8896
Difco Bacto Agar BD BD 214010
Nuclease-free duplex buffer IDT 11-05-01-12
QuickExtract solution Lucigen QE09050

Critical commercial assays

ZymoPURE II Plasmid Midiprep Kit Zymo Research D4200
ZymoPURE II Plasmid Miniprep Kit Zymo Research D4211
DNA Clean & Concentrator-25 Zymo Research D4033
Neon electroporator Thermo Fisher Scientific MPK5000
10 μL Neon transfection kit Thermo Fisher Scientific MPK1025
QuantStudio 7 Pro Thermo Fisher Scientific A43185
Light board Artograph LightPad 940LX
FACS sorter Sony MA-900

Experimental models: Organisms/strains

Chlamydomonas WT (+) Chlamydomonas Resource Center CC-620
Chlamydomonas WT (-) Chlamydomonas Resource Center CC-621
Chlamydomonas WT (-) Dutcher Lab CC124 32M
Chlamydomonas WT (+) Chlamydomonas Resource Center CC-125

Oligonucleotides

Alt-R CRISPR-Cas9 tracrRNA, 20 nmol IDT Cat#1072533
CRISPR-Cas9 crRNAs, 2 nmol IDT N/A
crMTM_q_1F IDT TGCTAGCTCAATCTGACTGAAGGT
crMTM_q_1R IDT GGGACATGGTGCTCGGGG
crMTP_q_1F IDT AGTATCACAGTACGGAATGCCC
crMTP_q_1R IDT TCATTGTTTGCTAGGGGTGC

Recombinant DNA

pAB262_NAT-R This study N/A
pAPN_BSD This study N/A
pAPN_AphVIII This study N/A
pAPN_AadA This study N/A
pAPN_noAB-ARMC2-BSD-ccdb This study N/A
pAPN_noAB-ARMC2-PAR-ccdb This study N/A
pAPN_noAB-ARMC2-NAT-ccdb This study N/A
Custom synthetic fragments Twist Bioscience N/A
Custom synthetic fragments IDT N/A
Custom synthetic fragments Eurofins Genomics N/A

Software and algorithms

Geneious Prime Biomatters 2021-2023.0.1
Design and Analysis Thermo Fisher Scientific 2.6.0
Fiji Fiji https://imagej.net/software/fiji/
iQ3 Andor https://andor.oxinst.com/products/iq-live-cell-imaging-software/