Table 3.
Enrichment scores for canine CD4+ PTCL compared to human thymocyte and early T-cell gene signatures
| Gene Set | Normalized enrichment score | padj | FDR |
|---|---|---|---|
| GSE1460: Early T lymphocyte gene signature | 2.66 | 0.003 | 0.002 |
| GSE1460: Genes upregulated in intrathymic T-progenitor cells compared to naïve CD4+ T-cells | 2.08 | 0.003 | 0.002 |
| GSE1460: Genes upregulated in CD4 SP thymocytes compared to naïve CD4+ T-cells | 1.58 | 0.006 | 0.005 |
| GSE1460: Genes upregulated in CD4/CD8 DP thymocytes compared to naïve CD4+ T-cells | 1.51 | 0.01 | 0.01 |
| GSE139242: Genes upregulated in infant CD4+ thymocytes compared to CD4+ T-cells in infant blood | 2.78 | 4.25e-10 | 5.26e-11 |
| GSE139242: Genes upregulated in infant CD4+ thymocytes compared to CD4+ T-cells in adult blood | 2.50 | 4.25e-10 | 5.26e-11 |