Table 3.

List of significant windows and corresponding genes identified using the weighted F_ST approach

Comparison	CHI	Start (bp)	End (bp)	N SNPs	W Fst	Genes
Metapopulation	6	13,500,001	14,000,000	6	0.158	ALPK1*, TIFA*, AP1AR*, C6H4orf32*
	6	13,750,001	14,250,000	6	0.297	–
	6	14,000,001	14,500,000	9	0.227	–
	17	1,000,001	1,500,000	8	0.145	PISD, SFI1, EIF4ENIF1, DRG1, PATZ1, PIK3IP1, LIMK2, CRKL, RNF185, PLA2G3, INPP5J, SMTN, MORC2
	19	33,000,001	33,500,000	11	0.160	PIGL, NCOR1, TTC19, ZSWIM7, ADORA2B, AKAP10, ULK2
PAL_MAJ	4	110,750,001	111,250,000	12	0.417	PEX1, TRNAG-CCC, GATAD1, ANKIB1, KRIT1, LRRD1, AKAP9, TRNAC-GCA
	6	37,750,001	38,250,000	7	0.540	FAM184B*, DCAF16*, NCAPG*, LCORL*, TRNAC-GCA
	6	111,500,001	112,000,000	7	0.420	PROM1, TAPT1, LDB2
	12	57,750,001	58,250,000	9	0.456	FRY, ZAR1L, BRCA2, N4BP2L1, N4BP2L2, PDS5B
	12	5,800,0001	5,850,0000	8	0.434	–
MAJ_TIN	2	99,000,001	99,500,000	8	0.198	TANC1, WDSUB1, BAZ2B, TRNAC-ACA
	6	13,750,001	14,250,000	6	0.251	–
	6	14,000,001	14,500,000	9	0.197	–
	6	35,000,001	35,500,000	9	0.247	CCSER1, MMRN1, SNCA
	19	19,000,001	19,500,000	6	0.210	NOS2, LYRM9, NLK
PAL_TIS	6	13,750,001	14,250,000	6	0.407	–
	6	17,750,001	18,250,000	7	0.378	PAPSS1*
	6	111,500,001	112,000,000	7	0.404	PROM1, TAPT1, LDB2
	9	20,250,001	20,750,000	6	0.373	NUS1, GOPC, DCBLD1, ROS1, VGLL2
	21	62,250,001	62,750,000	12	0.367	–
TIN_TIS	6	13,750,001	14,250,000	6	0.248	–
	6	14,000,001	14,500,000	9	0.211	/
	6	37,750,001	38,250,000	7	0.222	FAM184B*, DCAF16*, NCAPG*, LCORL*, TRNAC-GCA
	11	38,000,001	38,500,000	6	0.242	EFEMP1, MIR217, MIR216B, CCDC85A
	12	60,500,001	61,000,000	5	0.223	NBEA, MAB21L1, TRNAE-UUC

Chromosome (CHI), start and end position, number of SNPs (N) within the windows, weighted FST with relative genes are reported. All the genes detected in each significant window using the weighted FST approach are listed, with those that overlapped between comparisons indicated in italics and those that overlapped between approaches (ROH islands and FST) indicated using the * symbol