Table 3.
Protein, ligand, hydrogen bond and binding energy in molecular docking
Protein | PDB ID | Compounds | H-bond | Binding energy/(kJ∙mol-1) |
---|---|---|---|---|
AKT1 | 3O96 | Neomangiferin | GLU-85, ARG-273, THR-82, ASP-292, ILE-290, THR-211 | -10.7 |
AKT1 | 3O96 | Calycosin 7-O-glucoside | SER-205, LYS-268, ARG-273, CYS-296, GLU-298 | -10.7 |
EGFR | 7KXZ | Neomangiferin | ARG-841, ASN-842, LYS-745, PRO-794 | -9.1 |
EGFR | 7KXZ | Luteolin | MET-793, LYS-745 | -8.7 |
Note: AKT1, serine/threonine protein kinase 1; EGFR, epidermal growth factor receptor; GLU, glutamic acid; ARG, arginine; THR, threonine; ASP, aspartic acid; ILE, isoleucine; SER, serine; LYS, lysine; CYS, cysteine; ASN, asparagine; PRO, proline; MET, methionine.