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. 2023 Oct 27;52(D1):D81–D91. doi: 10.1093/nar/gkad925

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© The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — Case study panels of eRNAbase. (A) The navigation bar of eRNAbase. (B) Case study of CCAT1 query in target gene search. CCAT1 is a well-investigated eRNAs that plays key roles in cancers, especially in colon cancer. (C) Interactive result table of CCAT1 search, including the sample ID, eRNA ID, regions, genes and sample metadata information. (D-E) eRNA detailed information of the selected eRNA ‘Sample-01–013520459″, including eRNA overview, eRNA-mediated network, (epi)genetic annotation interactive table (TFBS, Super enhancer and Chromatin interaction), eRNA associated genes and eRNA expression. (F) Case study of NPPA super enhancer query in genomic region search. (G) Interactive result table of genomic region search. (H–I) eRNA detailed annotation information of the selected eRNA ‘Sample-01–02490014’.