Figure 5.

Side-by-side of original figure and model. (A) From the original figure (16), identifiable gene names were extracted by the Pathway Figure OCR pipeline, pfocr.wikipathways.org/figures/PMC6143874__etm-16-04-3275-g02.html. (B) The corresponding curated pathway model on WikiPathways, wikipathways.org/instance/WP5358 (17), which can then be used in a variety of downstream analyses and visualizations. The pathway model can be styled in Cytoscape (colors, shapes, labels, graphical annotations) to create a publication-ready pathway figure, for example to recreate the look of the original figure (see the section on Data Analysis and Visualization).