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. 2023 Oct 30;52(D1):D434–D441. doi: 10.1093/nar/gkad928

Table 2.

MIADE fields in DisProt

MIADE field DisProt field Ontology/CV Proteins Regions
Construct alterations Protein mutation HGVS nomenclature 77 183
Protein modification PSI-MOD ontology 31 89
Tag PSI-MI ontology 22 63
Non-standard amino acid PSI-MOD ontology 15 23
Label and dyes PSI-MI ontology 3 6
Experimental conditionsa pH NCI Thesaurus OBO Edition CV 13 34
Temperature NCI Thesaurus OBO Edition CV 4 8
Pressure NCI Thesaurus OBO Edition CV 0 0
Oxidation-reduction potential NCI Thesaurus OBO Edition CV 0 0
Sample Interacting small molecule IDPO ontology 152 356
Interacting protein IDPO ontology 134 278
Interacting nucleic acid IDPO ontology 12 27
Interacting lipid IDPO ontology 8 16
Interacting antibody IDPO ontology 8 11
Interacting membrane IDPO ontology 5 11
In-cell experiment IDPO ontology 3 5

aThe units of parameters describing experimental conditions are defined in the Measurement Ontology and deviations from the expected value in the experimental parameters are expressed by the following descriptors: ‘within normal range’, ‘increased’, ‘decreased’, ‘not specified’, ‘not relevant’.