Table 3.

The genes with the top 10 differential expression multiples

Group	miRNA	mRNA
3 dpi	miR-152-1, miR-122-5p, miR-93-5p, miR-199a-5p, novel_mir156, miR-30c, miR-135b, miR-103b, novel_mir67, miR-1301	DPYSL3, IL36G, SOX11, IL-6, CXCL8, TNFAIP2, SOCS3, EMX2, OLIG1, CCN3
5 dpi	miR-23b-3p-2, miR-107, miR-29a, miR-28-5p, miR-134-5p, miR-21-5p, miR-9-5p-1, miR-103-1, novel_mir128, novel_mir7	CCL15, CCL21, SOCS1, IFIH1, C1QB, STAT4, IRF1, CCL5, CXCL9, IFIT3, TLR2, SELE
7 dpi	miR-125b, miR-126-1, miR-200b-5p, miR-205-1, miR-199a-3p, miR-760-3p, miR-425-5p-1, miR-34a, miR-30e-3p, miR-26c-1	HSPH1, SPHKAP, SP7, SEMA7A, IFIT5, ISG20, IRF7, MX2, ISG15, PCDH10
3 dpi, 5 dpi	miR-191-5p, miR-3120, miR-409-3p-2, miR-9c-3p, miR-148a-3p, miR-34a-3p, miR-885, miR-324-3p, miR-148a-5p, miR-335	IL1B, CCL20, CSF3, BIRC3, BCL3, TNFAIP3, FOSB, SMAD9, GNG7, MUC4
5 dpi, 7 dpi	miR-449b, miR-106b-3p, miR-449a, novel_mir76, miR-425-5p-2, miR-31, novel_mir214, miR-16b, miR-218	CXCL11, CXCL13, CXCR3, CD3E, CD28, C1QC, TRIM22, IFIT2, MX1, LTF
3 dpi, 7 dpi	miR-26a, miR-143-3p, miR-429-1, miR-425-3p-4, novel_mir222, miR-100-5p	REM2, CHGB, LPO, CDYL2, STMN1, LY6D, PADI4, NEUROD1, ELAVL4, TEX15
3 dpi, 5 dpi, 7 dpi	miR-199b-2-5p, miR-3604, miR-126-3p-1, miR-429-2, miR-429, novel_mir259, miR-126-3p	S100A8, S100A9, S100A12, STMN2, GNG8, MYO3B, NHLH1, GAP43, ACTL6B, MEF2B