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[Preprint]. 2023 Dec 20:2023.12.20.572574. [Version 1] doi: 10.1101/2023.12.20.572574

Figure 4: ML phylogeny of strain-specific consensus sequences for Tsu4 internal regions in all S. paradoxus, S. cerevisiae, S. eubayanus and S. uvarum.

Figure 4:

Shown is the phylogeny reconstructed with 1,817 distinct alignment sites from 419 strain-specific consensus sequences. The consensus sequence is computed for each S. paradoxus, S. cerevisiae, S. eubayanus, and S. uvarum strain that has >0.75 depth and >0.9 breadth in its Tsu4 internal region. Tip points are colored by species. The phylogeny is midpoint rooted. Bootstrap supporting values are annotated for key nodes. Key clades are annotated with host lineage and/or clade numbers from the Tsu4 FLE phylogeny.