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[Preprint]. 2023 Dec 20:2023.12.20.572574. [Version 1] doi: 10.1101/2023.12.20.572574

Figure 5: ML phylogeny for 5’ and 3’ internal regions from Tsu4 FLEs in S. mikatae, S. jurei, and S. uvarum, plus representatives of Ty4 elements.

Figure 5:

Panel (A) shows the ML phylogeny for 5’ internal region containing 459 distinct alignment sites; Panel (B) shows 3’ internal region containing 455 distinct alignment sites. Internal coding regions from 71 Ty4 and Tsu4 FLEs are included in both panels. Both trees are midpoint rooted, and visualized in the same tree scale which is shown in units of substitutions per site. Bootstrap supporting values are annotated for key nodes.